Conservation of cofitness between PS417_17725 and PS417_12045 in Pseudomonas simiae WCS417

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_17725 ribose ABC transporter permease 1.0 PS417_12045 iditol 2-dehydrogenase 0.23 7
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS05325 ribose ABC transporter permease 0.17 HSERO_RS05485 phosphoesterase low > 78
Klebsiella michiganensis M5al 0.38 BWI76_RS00280 ribose ABC transporter permease 0.20 BWI76_RS11545 NAD(P)-dependent alcohol dehydrogenase low > 92
Escherichia coli ECOR38 0.38 HEPCGN_13450 rbsC ribose ABC transporter permease 0.21 HEPCGN_05145 ydjJ Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ low > 87
Escherichia coli ECRC102 0.38 NIAGMN_12495 rbsC ribose ABC transporter permease 0.21 NIAGMN_01310 ydjJ Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ — —
Escherichia coli ECRC99 0.38 KEDOAH_13410 rbsC ribose ABC transporter permease 0.21 KEDOAH_01355 ydjJ Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ — —
Escherichia coli ECOR27 0.38 NOLOHH_06875 rbsC ribose ABC transporter permease 0.21 NOLOHH_17285 ydjJ Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ low > 75
Escherichia coli Nissle 1917 0.38 ECOLIN_RS21560 ribose ABC transporter permease 0.21 ECOLIN_RS09895 NAD(P)-dependent alcohol dehydrogenase — —
Escherichia coli BL21 0.38 ECD_03636 D-ribose ABC transporter permease 0.21 ECD_01743 putative Zn-dependent NAD(P)-binding oxidoreductase — —
Escherichia coli BW25113 0.38 b3750 rbsC ribose ABC transporter permease protein (NCBI) 0.21 b1774 ydjJ predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC100 0.38 OKFHMN_14740 rbsC ribose ABC transporter permease 0.21 OKFHMN_26755 ydjJ Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ low > 80
Escherichia coli ECRC101 0.38 MCAODC_05245 rbsC ribose ABC transporter permease 0.21 MCAODC_18655 ydjJ Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ low > 87
Escherichia coli ECRC62 0.38 BNILDI_04650 rbsC ribose ABC transporter permease 0.21 BNILDI_16070 ydjJ Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ low > 75
Escherichia coli ECRC98 0.38 JDDGAC_18360 rbsC ribose ABC transporter permease 0.21 JDDGAC_01330 ydjJ Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ low > 86
Escherichia fergusonii Becca 0.38 EFB2_04883 Ribose import permease protein RbsC 0.21 EFB2_02220 putative zinc-type alcohol dehydrogenase-like protein YdjJ low > 86
Azospirillum sp. SherDot2 0.35 MPMX19_03311 Ribose import permease protein RbsC 0.25 MPMX19_00618 Sorbitol dehydrogenase low > 112
Sinorhizobium meliloti 1021 0.35 SM_b21375 sugar uptake ABC transporter permease 0.18 SM_b20445 alcohol dehydrogenase low > 103
Rhizobium sp. OAE497 0.32 ABIE40_RS24655 ABC transporter permease 0.15 ABIE40_RS25805 L-idonate 5-dehydrogenase low > 107
Variovorax sp. OAS795 0.30 ABID97_RS19770 ABC transporter permease 0.19 ABID97_RS01200 L-idonate 5-dehydrogenase low > 91
Variovorax sp. SCN45 0.30 GFF2610 Fructose ABC transporter, permease component FrcC 0.18 GFF5779 L-idonate 5-dehydrogenase (EC 1.1.1.264) low > 127
Bosea sp. OAE506 0.25 ABIE41_RS06850 ABC transporter permease 0.18 ABIE41_RS09605 L-idonate 5-dehydrogenase low > 77

Not shown: 28 genomes with orthologs for PS417_17725 only; 17 genomes with orthologs for PS417_12045 only