Conservation of cofitness between EX31_RS17800 and EX31_RS06660 in Rahnella sp. WP5

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS17800 citrate lyase subunit alpha 1.0 EX31_RS06660 arabinose operon transcriptional regulator AraC 0.38 1
Enterobacter asburiae PDN3 0.86 EX28DRAFT_3004 citrate lyase, alpha subunit 0.49 EX28DRAFT_3656 AraC-type DNA-binding domain-containing proteins low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_03824 Citrate lyase alpha chain 0.49 MPMX20_00758 Arabinose operon regulatory protein low > 85
Pectobacterium carotovorum WPP14 0.80 HER17_RS12165 citrate lyase subunit alpha 0.84 HER17_RS10795 arabinose operon transcriptional regulator AraC low > 75
Dickeya dadantii 3937 0.79 DDA3937_RS09790 citrate lyase subunit alpha 0.81 DDA3937_RS10610 arabinose operon transcriptional regulator AraC — —
Dickeya dianthicola 67-19 0.79 HGI48_RS09805 citrate lyase subunit alpha 0.80 HGI48_RS10610 arabinose operon transcriptional regulator AraC low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS10115 citrate lyase subunit alpha 0.80 DZA65_RS11090 arabinose operon transcriptional regulator AraC low > 75
Klebsiella michiganensis M5al 0.67 BWI76_RS04450 citrate lyase subunit alpha 0.48 BWI76_RS04595 DNA-binding transcriptional regulator AraC low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF219 Citrate lyase alpha chain (EC 4.1.3.6) 0.48 GFF176 Arabinose operon regulatory protein low > 78
Escherichia coli ECRC62 0.66 BNILDI_21845 citF citrate lyase subunit alpha 0.48 BNILDI_08490 araC arabinose operon transcriptional regulator AraC low > 75
Escherichia coli Nissle 1917 0.66 ECOLIN_RS03360 citrate lyase subunit alpha 0.48 ECOLIN_RS00340 arabinose operon transcriptional regulator AraC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03090 Citrate lyase alpha chain 0.48 OHPLBJKB_03594 Arabinose operon regulatory protein low > 73
Escherichia fergusonii Becca 0.66 EFB2_03476 Citrate lyase alpha chain 0.48 EFB2_03981 Arabinose operon regulatory protein low > 86
Escherichia coli BL21 0.66 ECD_00583 citrate lyase, citrate-ACP transferase (alpha) subunit 0.48 ECD_00066 ara regulon transcriptional activator; autorepressor low > 61
Escherichia coli ECOR27 0.66 NOLOHH_23835 citF citrate lyase subunit alpha 0.48 NOLOHH_03120 araC arabinose operon transcriptional regulator AraC low > 75
Escherichia coli ECOR38 0.66 HEPCGN_00815 citF citrate lyase subunit alpha 0.48 HEPCGN_08765 araC arabinose operon transcriptional regulator AraC low > 87
Escherichia coli BW25113 0.65 b0615 citF citrate lyase, citrate-ACP transferase (alpha) subunit (NCBI) 0.48 b0064 araC DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECRC102 0.65 NIAGMN_05515 citF citrate lyase subunit alpha 0.48 NIAGMN_08625 araC arabinose operon transcriptional regulator AraC — —
Escherichia coli ECRC98 0.65 JDDGAC_11105 citF citrate lyase subunit alpha 0.48 JDDGAC_14370 araC arabinose operon transcriptional regulator AraC low > 86
Escherichia coli ECRC99 0.65 KEDOAH_20510 citF citrate lyase subunit alpha 0.48 KEDOAH_17380 araC arabinose operon transcriptional regulator AraC — —
Escherichia coli ECRC100 0.65 OKFHMN_07460 citF citrate lyase subunit alpha 0.48 OKFHMN_10775 araC arabinose operon transcriptional regulator AraC low > 80
Escherichia coli ECRC101 0.65 MCAODC_26675 citF citrate lyase subunit alpha 0.48 MCAODC_01290 araC arabinose operon transcriptional regulator AraC low > 87
Serratia liquefaciens MT49 0.64 IAI46_16990 citrate lyase subunit alpha 0.83 IAI46_11525 arabinose operon transcriptional regulator AraC low > 86

Not shown: 4 genomes with orthologs for EX31_RS17800 only; 1 genomes with orthologs for EX31_RS06660 only