Conservation of cofitness between ECD_04269 and ECD_04047 in Escherichia coli BL21

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04269 transcriptional repressor, tryptophan-binding 1.0 ECD_04047 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent 0.59 1
Escherichia coli BW25113 1.00 b4393 trpR Trp operon repressor (NCBI) 1.00 b4180 rlmB 23S rRNA (Gm2251)-methyltransferase (NCBI) 0.17 65
Escherichia coli Nissle 1917 1.00 ECOLIN_RS25215 trp operon repressor 1.00 ECOLIN_RS24270 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_03668 Trp operon repressor 1.00 OHPLBJKB_03862 '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11 low > 73
Escherichia coli ECRC99 0.90 KEDOAH_16990 trpR trp operon repressor 1.00 KEDOAH_15940 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB — —
Escherichia coli ECRC102 0.90 NIAGMN_09015 trpR trp operon repressor 1.00 NIAGMN_10065 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB — —
Escherichia coli ECRC100 0.90 OKFHMN_11165 trpR trp operon repressor 1.00 OKFHMN_12215 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 80
Escherichia coli ECOR27 0.90 NOLOHH_03495 trpR trp operon repressor 1.00 NOLOHH_04480 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 75
Escherichia coli ECRC98 0.90 JDDGAC_14760 trpR trp operon repressor 1.00 JDDGAC_15855 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 86
Escherichia coli ECRC62 0.90 BNILDI_08100 trpR trp operon repressor 1.00 BNILDI_07010 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 75
Escherichia coli ECRC101 0.90 MCAODC_01680 trpR trp operon repressor 1.00 MCAODC_02730 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 87
Escherichia fergusonii Becca 0.90 EFB2_04051 Trp operon repressor 1.00 EFB2_04355 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB low > 86
Escherichia coli ECOR38 0.88 HEPCGN_09170 trpR trp operon repressor 1.00 HEPCGN_10445 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 87
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3603 Trp operon repressor 0.97 EX28DRAFT_3377 rRNA methylase, putative, group 3 — —
Enterobacter sp. TBS_079 0.78 MPMX20_00700 Trp operon repressor 0.96 MPMX20_00461 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS04190 Trp operon repressor 0.96 BWI76_RS02580 23S rRNA (guanosine(2251)-2'-O)-methyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF1061 Transcriptional repressor protein TrpR 0.97 GFF833 '23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)' transl_table=11 low > 78
Erwinia tracheiphila SCR3 0.66 LU632_RS02580 trpR trp operon repressor 0.85 LU632_RS21745 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 74
Serratia liquefaciens MT49 0.59 IAI46_02990 trp operon repressor 0.87 IAI46_01665 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS02755 trp operon repressor 0.84 HER17_RS03840 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 75
Dickeya dadantii 3937 0.54 DDA3937_RS18450 trp operon repressor 0.87 DDA3937_RS17255 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 74
Dickeya dianthicola 67-19 0.53 HGI48_RS18380 trp operon repressor 0.87 HGI48_RS17310 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB — —
Dickeya dianthicola ME23 0.53 DZA65_RS19520 trp operon repressor 0.86 DZA65_RS18400 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 75
Rahnella sp. WP5 0.51 EX31_RS03980 trp operon repressor 0.85 EX31_RS08780 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 89

Not shown: 0 genomes with orthologs for ECD_04269 only; 68 genomes with orthologs for ECD_04047 only