Conservation of cofitness between ECD_02880 and ECD_03850 in Escherichia coli BL21

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02880 membrane spanning protein in TonB-ExbB-ExbD complex 1.0 ECD_03850 tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase 0.64 18
Escherichia coli BW25113 1.00 b3006 exbB membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) 1.00 b3965 trmA tRNA (uracil-5-)-methyltransferase (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_00803 Biopolymer transport protein ExbB 0.99 EFB2_04645 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS17305 tol-pal system-associated acyl-CoA thioesterase 0.99 ECOLIN_RS22900 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 55
Escherichia coli ECRC101 0.99 MCAODC_09480 exbB tol-pal system-associated acyl-CoA thioesterase 0.99 MCAODC_04035 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 87
Escherichia coli ECRC102 0.99 NIAGMN_16730 exbB tol-pal system-associated acyl-CoA thioesterase 1.00 NIAGMN_11285 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA — —
Escherichia coli ECOR38 0.99 HEPCGN_17830 exbB tol-pal system-associated acyl-CoA thioesterase 0.99 HEPCGN_12190 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 87
Escherichia coli ECRC62 0.99 BNILDI_00775 exbB tol-pal system-associated acyl-CoA thioesterase 1.00 BNILDI_05845 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Escherichia coli ECRC99 0.99 KEDOAH_09180 exbB tol-pal system-associated acyl-CoA thioesterase 1.00 KEDOAH_14625 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00694 Biopolymer transport protein ExbB 1.00 OHPLBJKB_04085 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 73
Escherichia coli ECRC98 0.99 JDDGAC_22600 exbB tol-pal system-associated acyl-CoA thioesterase 1.00 JDDGAC_17160 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 86
Escherichia coli ECOR27 0.99 NOLOHH_10740 exbB tol-pal system-associated acyl-CoA thioesterase 1.00 NOLOHH_05680 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Escherichia coli ECRC100 0.99 OKFHMN_18965 exbB tol-pal system-associated acyl-CoA thioesterase 1.00 OKFHMN_13535 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF3118 MotA/TolQ/ExbB proton channel family protein 0.94 GFF2351 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) low > 78
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3045 tonB-system energizer ExbB 0.92 EX28DRAFT_4428 tRNA (uracil(54)-C(5))-methyltransferase low > 76
Enterobacter sp. TBS_079 0.84 MPMX20_03851 Biopolymer transport protein ExbB 0.93 MPMX20_04515 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 85
Klebsiella michiganensis M5al 0.82 BWI76_RS24280 biopolymer transporter ExbB 0.93 BWI76_RS00885 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 92
Erwinia tracheiphila SCR3 0.76 LU632_RS20540 exbB tol-pal system-associated acyl-CoA thioesterase 0.78 LU632_RS19550 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 74
Dickeya dadantii 3937 0.73 DDA3937_RS01820 tol-pal system-associated acyl-CoA thioesterase 0.81 DDA3937_RS00990 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 74
Pantoea sp. MT58 0.71 IAI47_03235 tol-pal system-associated acyl-CoA thioesterase 0.83 IAI47_00950 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 76

Not shown: 1 genomes with orthologs for ECD_02880 only; 27 genomes with orthologs for ECD_03850 only