Conservation of cofitness between ECD_03418 and ECD_03086 in Escherichia coli BL21

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03418 D-xylose transporter subunit 1.0 ECD_03086 sialic acid-inducible nan operon repressor 0.68 7
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00138 D-xylose-binding periplasmic protein 1.00 OHPLBJKB_00479 HTH-type transcriptional repressor NanR low > 73
Escherichia coli ECRC98 1.00 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein 1.00 JDDGAC_21470 nanR transcriptional regulator NanR low > 86
Escherichia coli ECRC101 1.00 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein 1.00 MCAODC_08365 nanR transcriptional regulator NanR low > 87
Escherichia coli BW25113 1.00 b3566 xylF D-xylose transporter subunit (NCBI) 1.00 b3226 yhcK putative FADA-type transcriptional regulator (VIMSS) low > 76
Escherichia coli ECRC100 1.00 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein 1.00 OKFHMN_17845 nanR transcriptional regulator NanR low > 80
Escherichia coli ECRC99 1.00 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein 1.00 KEDOAH_10305 nanR transcriptional regulator NanR — —
Escherichia coli ECRC102 1.00 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein 1.00 NIAGMN_15605 nanR transcriptional regulator NanR — —
Escherichia coli ECOR27 1.00 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein 1.00 NOLOHH_09645 nanR transcriptional regulator NanR low > 75
Escherichia coli ECRC62 1.00 BNILDI_03650 xylF D-xylose ABC transporter substrate-binding protein 1.00 BNILDI_01890 nanR transcriptional regulator NanR low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20395 D-xylose ABC transporter substrate-binding protein 0.97 ECOLIN_RS18510 transcriptional regulator NanR low > 55
Escherichia coli ECOR38 1.00 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein 1.00 HEPCGN_16720 nanR transcriptional regulator NanR low > 87
Escherichia fergusonii Becca 1.00 EFB2_00241 D-xylose-binding periplasmic protein 0.97 EFB2_00603 HTH-type transcriptional repressor NanR low > 86
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS22460 xylose ABC transporter substrate-binding protein 0.24 HSERO_RS06880 transcriptional regulator low > 78
Paraburkholderia graminis OAS925 0.60 ABIE53_004930 D-xylose transport system substrate-binding protein 0.31 ABIE53_006092 DNA-binding FadR family transcriptional regulator low > 113
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS25870 D-xylose ABC transporter substrate-binding protein 0.28 QEN71_RS38360 transcriptional regulator NanR low > 153
Rhizobium sp. OAE497 0.38 ABIE40_RS14020 D-xylose ABC transporter substrate-binding protein 0.26 ABIE40_RS24690 transcriptional regulator NanR low > 107
Sinorhizobium meliloti 1021 0.37 SM_b20902 sugar uptake ABC transporter substrate-binding protein precursor 0.39 SM_b20294 transcriptional regulator NanR low > 103
Variovorax sp. OAS795 0.37 ABID97_RS01175 D-xylose ABC transporter substrate-binding protein 0.14 ABID97_RS18830 FCD domain-containing protein — —

Not shown: 33 genomes with orthologs for ECD_03418 only; 3 genomes with orthologs for ECD_03086 only