Conservation of cofitness between ECD_00590 and ECD_02993 in Escherichia coli BL21

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00590 response regulator in two-component regulatory system with CitA 1.0 ECD_02993 D-galactarate dehydrogenase 0.58 3
Escherichia coli ECOR38 1.00 HEPCGN_00840 dpiA two-component response regulator DpiA 1.00 HEPCGN_17190 garD galactarate dehydratase low > 87
Escherichia coli ECRC100 1.00 OKFHMN_07435 dpiA two-component response regulator DpiA 1.00 OKFHMN_18355 garD galactarate dehydratase low > 80
Escherichia coli BW25113 1.00 b0620 citB DNA-binding response regulator in two-component regulatory system with citA (NCBI) 1.00 b3128 garD (D)-galactarate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_05490 dpiA two-component response regulator DpiA 1.00 NIAGMN_16115 garD galactarate dehydratase — —
Escherichia coli ECRC98 1.00 JDDGAC_11080 dpiA two-component response regulator DpiA 1.00 JDDGAC_21985 garD galactarate dehydratase low > 86
Escherichia coli ECRC62 1.00 BNILDI_21820 dpiA two-component response regulator DpiA 1.00 BNILDI_01395 garD galactarate dehydratase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03085 Transcriptional regulatory protein DpiA 1.00 OHPLBJKB_00575 Galactarate dehydratase (L-threo-forming) low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS03385 two-component response regulator DpiA 1.00 ECOLIN_RS17975 galactarate dehydratase — —
Escherichia coli ECRC101 1.00 MCAODC_26650 dpiA two-component response regulator DpiA 1.00 MCAODC_08865 garD galactarate dehydratase low > 87
Escherichia coli ECOR27 1.00 NOLOHH_23810 dpiA two-component response regulator DpiA 1.00 NOLOHH_10135 garD galactarate dehydratase low > 75
Escherichia fergusonii Becca 1.00 EFB2_03471 Transcriptional regulatory protein DpiA 0.99 EFB2_00691 Galactarate dehydratase (L-threo-forming) low > 86
Escherichia coli ECRC99 1.00 KEDOAH_20535 dpiA two-component response regulator DpiA 1.00 KEDOAH_09795 garD galactarate dehydratase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF4533 Transcriptional regulatory protein CitB, DpiA 0.95 GFF1534 D-galactarate dehydratase (EC 4.2.1.42) low > 78
Klebsiella michiganensis M5al 0.43 BWI76_RS04405 response regulator 0.94 BWI76_RS24840 galactarate dehydratase low > 92
Enterobacter asburiae PDN3 0.39 EX28DRAFT_2932 Response regulator of citrate/malate metabolism 0.94 EX28DRAFT_3184 galactarate dehydratase low > 76
Enterobacter sp. TBS_079 0.39 MPMX20_03728 Transcriptional regulatory protein DpiA 0.94 MPMX20_04037 Galactarate dehydratase (L-threo-forming) low > 85
Rahnella sp. WP5 0.38 EX31_RS13605 response regulator 0.85 EX31_RS07995 galactarate dehydratase low > 89
Dickeya dianthicola ME23 0.37 DZA65_RS10080 response regulator 0.84 DZA65_RS18190 galactarate dehydratase low > 75
Dickeya dianthicola 67-19 0.36 HGI48_RS09770 response regulator 0.84 HGI48_RS17115 galactarate dehydratase low > 71
Dickeya dadantii 3937 0.36 DDA3937_RS09755 response regulator 0.84 DDA3937_RS17065 galactarate dehydratase low > 74
Pectobacterium carotovorum WPP14 0.35 HER17_RS12200 response regulator 0.86 HER17_RS04070 galactarate dehydratase low > 75

Not shown: 3 genomes with orthologs for ECD_00590 only; 38 genomes with orthologs for ECD_02993 only