Conservation of cofitness between ECD_00067 and ECD_02838 in Escherichia coli BL21

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00067 DedA family inner membrane protein 1.0 ECD_02838 putative type II secretion protein GspD 0.70 18
Escherichia coli ECOR38 1.00 HEPCGN_08750 yabI Inner membrane protein YabI 1.00 HEPCGN_18050 gspD general secretion pathway protein D low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03593 Inner membrane protein YabI 1.00 OHPLBJKB_00739 Type II secretion system protein D low > 73
Escherichia coli ECRC102 1.00 NIAGMN_08620 yabI Inner membrane protein YabI 0.37 NIAGMN_28605 etpD variant type II secretion system secretin EtpD — —
Escherichia coli BW25113 1.00 b0065 yabI conserved inner membrane protein (NCBI) 0.38 b3325 yheF putative general protein secretion protein (VIMSS) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_14365 yabI Inner membrane protein YabI 0.37 JDDGAC_30295 etpD variant type II secretion system secretin EtpD — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00355 DedA family protein 1.00 ECOLIN_RS17085 type II secretion system secretin GspD low > 52
Escherichia coli ECRC101 1.00 MCAODC_01285 yabI Inner membrane protein YabI 0.37 MCAODC_15265 etpD variant type II secretion system secretin EtpD — —
Escherichia coli ECRC101 1.00 OKFHMN_10770 yabI Inner membrane protein YabI 0.37 OKFHMN_00285 etpD variant type II secretion system secretin EtpD — —
Escherichia coli ECOR27 0.99 NOLOHH_03115 yabI Inner membrane protein YabI 1.00 NOLOHH_10975 gspD general secretion pathway protein D low > 57
Escherichia fergusonii Becca 0.98 EFB2_03980 Inner membrane protein YabI 0.99 EFB2_00845 Secretin GspD 2 low > 86
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3657 Uncharacterized membrane-associated protein 0.37 EX28DRAFT_2079 type II secretion system protein D low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_00759 Inner membrane protein YabI 0.35 MPMX20_01515 Putative secretin GspD low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS04600 inner membrane protein 0.38 BWI76_RS05090 type II secretion system protein GspD low > 92
Pectobacterium carotovorum WPP14 0.66 HER17_RS03005 DedA family protein 0.38 HER17_RS06685 type II secretion system secretin GspD low > 75
Dickeya dadantii 3937 0.62 DDA3937_RS18180 DedA family protein 0.24 DDA3937_RS12700 type II secretion system secretin GspD low > 74
Dickeya dianthicola 67-19 0.62 HGI48_RS18130 DedA family protein 0.23 HGI48_RS15450 type II secretion system secretin GspD low > 71
Dickeya dianthicola ME23 0.62 DZA65_RS19280 DedA family protein 0.23 DZA65_RS16270 type II secretion system secretin GspD low > 75
Erwinia tracheiphila SCR3 0.61 LU632_RS02820 DedA family protein 0.25 LU632_RS25230 gspD type II secretion system secretin GspD low > 74
Rahnella sp. WP5 0.57 EX31_RS03735 DedA family protein 0.39 EX31_RS16165 type II secretion system secretin GspD low > 89

Not shown: 5 genomes with orthologs for ECD_00067 only; 37 genomes with orthologs for ECD_02838 only