Conservation of cofitness between ECD_00433 and ECD_02567 in Escherichia coli BL21

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00433 TraB family protein 1.0 ECD_02567 protease involved in processing C-terminal end of HycE 0.44 3
Escherichia coli BW25113 1.00 b0482 ybaP hypothetical protein (NCBI) 1.00 b2717 hycI protease involved in processing C-terminal end of HycE (NCBI) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_01025 ybaP Uncharacterized protein YbaP 0.99 NOLOHH_12455 hycI hydrogenase maturation peptidase HycI low > 75
Escherichia fergusonii Becca 0.99 EFB2_03576 hypothetical protein 0.97 EFB2_01206 Hydrogenase 3 maturation protease low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03192 hypothetical protein 1.00 OHPLBJKB_01017 Hydrogenase 3 maturation protease low > 73
Escherichia coli ECOR38 0.99 HEPCGN_06715 ybaP Uncharacterized protein YbaP 0.99 HEPCGN_19800 hycI hydrogenase maturation peptidase HycI low > 87
Escherichia coli ECRC98 0.99 JDDGAC_11740 ybaP Uncharacterized protein YbaP 0.99 JDDGAC_24275 hycI hydrogenase maturation peptidase HycI low > 86
Escherichia coli ECRC101 0.99 MCAODC_27315 ybaP Uncharacterized protein YbaP 0.99 MCAODC_11135 hycI hydrogenase maturation peptidase HycI low > 87
Escherichia coli ECRC100 0.99 OKFHMN_08095 ybaP Uncharacterized protein YbaP 0.99 OKFHMN_20610 hycI hydrogenase maturation peptidase HycI low > 80
Escherichia coli ECRC99 0.99 KEDOAH_19875 ybaP Uncharacterized protein YbaP 0.99 KEDOAH_07525 hycI hydrogenase maturation peptidase HycI — —
Escherichia coli ECRC102 0.99 NIAGMN_06145 ybaP Uncharacterized protein YbaP 0.99 NIAGMN_18380 hycI hydrogenase maturation peptidase HycI — —
Escherichia coli ECRC62 0.99 BNILDI_22445 ybaP Uncharacterized protein YbaP 0.99 BNILDI_11005 hycI hydrogenase maturation peptidase HycI low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02855 TraB/GumN family protein 0.98 ECOLIN_RS15185 hydrogenase maturation peptidase HycI — —
Klebsiella michiganensis M5al 0.71 BWI76_RS06875 conjugal transfer protein TraB 0.88 BWI76_RS22300 hydrogenase 3 maturation endopeptidase HyCI low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF4402 FIG00921183: possible ligase 0.92 GFF4710 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) low > 78
Enterobacter sp. TBS_079 0.65 MPMX20_01083 hypothetical protein 0.85 MPMX20_03602 Hydrogenase 3 maturation protease low > 85
Enterobacter asburiae PDN3 0.64 EX28DRAFT_2475 Uncharacterized protein conserved in bacteria 0.86 EX28DRAFT_2808 hydrogenase maturation protease HycI low > 76
Serratia liquefaciens MT49 0.61 IAI46_05305 TraB/GumN family protein 0.71 IAI46_12500 hydrogenase maturation peptidase HycI low > 86
Rahnella sp. WP5 0.56 EX31_RS22570 conjugal transfer protein TraB 0.64 EX31_RS19940 hydrogenase maturation peptidase HycI low > 89
Dickeya dianthicola ME23 0.49 DZA65_RS06220 hypothetical protein 0.65 DZA65_RS07810 hydrogenase maturation peptidase HycI low > 75
Dickeya dadantii 3937 0.49 DDA3937_RS05840 TraB/GumN family protein 0.65 DDA3937_RS07425 hydrogenase maturation peptidase HycI low > 74
Dickeya dianthicola 67-19 0.49 HGI48_RS05885 TraB/GumN family protein 0.65 HGI48_RS07300 hydrogenase maturation peptidase HycI low > 71

Not shown: 15 genomes with orthologs for ECD_00433 only; 3 genomes with orthologs for ECD_02567 only