Conservation of cofitness between ECD_04080 and ECD_02563 in Escherichia coli BL21

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04080 D-alanine/D-serine/glycine transporter 1.0 ECD_02563 formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit 0.48 54
Escherichia coli ECOR27 1.00 NOLOHH_04330 cycA D-serine/D-alanine/glycine transporter 1.00 NOLOHH_12475 hydN electron transport protein HydN low > 75
Escherichia coli ECRC62 1.00 BNILDI_07190 cycA D-serine/D-alanine/glycine transporter 1.00 BNILDI_11035 hydN electron transport protein HydN low > 75
Escherichia coli ECRC99 1.00 KEDOAH_16085 cycA D-serine/D-alanine/glycine transporter 1.00 KEDOAH_07505 hydN electron transport protein HydN — —
Escherichia coli ECRC101 1.00 MCAODC_02585 cycA D-serine/D-alanine/glycine transporter 1.00 MCAODC_11155 hydN electron transport protein HydN low > 87
Escherichia coli ECRC98 1.00 JDDGAC_15710 cycA D-serine/D-alanine/glycine transporter 1.00 JDDGAC_24295 hydN electron transport protein HydN low > 86
Escherichia coli BW25113 1.00 b4208 cycA D-alanine/D-serine/glycine transporter (NCBI) 1.00 b2713 hydN formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_09920 cycA D-serine/D-alanine/glycine transporter 1.00 NIAGMN_18400 hydN electron transport protein HydN — —
Escherichia coli ECRC100 1.00 OKFHMN_12070 cycA D-serine/D-alanine/glycine transporter 1.00 OKFHMN_20630 hydN electron transport protein HydN low > 80
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24450 D-serine/D-alanine/glycine transporter 1.00 ECOLIN_RS15160 electron transport protein HydN low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03827 D-serine/D-alanine/glycine transporter 1.00 OHPLBJKB_01021 Hydrogenase-4 component A low > 73
Escherichia fergusonii Becca 0.99 EFB2_04320 D-serine/D-alanine/glycine transporter 1.00 EFB2_01211 Hydrogenase-4 component A low > 86
Escherichia coli ECOR38 0.99 HEPCGN_10275 cycA D-serine/D-alanine/glycine transporter 1.00 HEPCGN_19830 hydN electron transport protein HydN low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF861 D-serine/D-alanine/glycine transporter 0.96 GFF4707 Fe-S-cluster-containing hydrogenase components 2 low > 78
Enterobacter sp. TBS_079 0.96 MPMX20_00484 D-serine/D-alanine/glycine transporter 0.90 MPMX20_03598 Iron-sulfur protein low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3391 Gamma-aminobutyrate permease and related permeases 0.90 EX28DRAFT_2804 Fe-S-cluster-containing hydrogenase components 2 low > 76
Klebsiella michiganensis M5al 0.92 BWI76_RS02700 D-serine/D-alanine/glycine transporter 0.92 BWI76_RS22280 formate dehydrogenase-H ferredoxin subunit low > 92
Serratia liquefaciens MT49 0.85 IAI46_09060 D-serine/D-alanine/glycine transporter 0.74 IAI46_12495 electron transport protein HydN — —
Rahnella sp. WP5 0.80 EX31_RS24110 D-serine/D-alanine/glycine transporter 0.71 EX31_RS19945 electron transport protein HydN low > 89
Pectobacterium carotovorum WPP14 0.78 HER17_RS07690 D-serine/D-alanine/glycine transporter 0.50 HER17_RS21750 4Fe-4S dicluster domain-containing protein — —
Dickeya dadantii 3937 0.76 DDA3937_RS13720 D-serine/D-alanine/glycine transporter 0.56 DDA3937_RS07410 4Fe-4S dicluster domain-containing protein low > 74
Dickeya dianthicola ME23 0.73 DZA65_RS14305 D-serine/D-alanine/glycine transporter 0.56 DZA65_RS07795 4Fe-4S dicluster domain-containing protein low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS13815 D-serine/D-alanine/glycine transporter 0.56 HGI48_RS07285 4Fe-4S dicluster domain-containing protein low > 71

Not shown: 18 genomes with orthologs for ECD_04080 only; 3 genomes with orthologs for ECD_02563 only