Conservation of cofitness between ECD_04269 and ECD_02535 in Escherichia coli BL21

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04269 transcriptional repressor, tryptophan-binding 1.0 ECD_02535 glycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein 0.44 15
Escherichia coli BW25113 1.00 b4393 trpR Trp operon repressor (NCBI) 1.00 b2679 proX glycine betaine transporter subunit (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS25215 trp operon repressor 0.99 ECOLIN_RS14940 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 55
Escherichia coli ECRC101 0.90 MCAODC_01680 trpR trp operon repressor 1.00 MCAODC_11335 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 87
Escherichia coli ECRC98 0.90 JDDGAC_14760 trpR trp operon repressor 1.00 JDDGAC_24475 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 86
Escherichia coli ECOR27 0.90 NOLOHH_03495 trpR trp operon repressor 1.00 NOLOHH_12650 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 75
Escherichia coli ECRC100 0.90 OKFHMN_11165 trpR trp operon repressor 1.00 OKFHMN_20810 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 80
Escherichia coli ECRC99 0.90 KEDOAH_16990 trpR trp operon repressor 1.00 KEDOAH_07325 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX — —
Escherichia coli ECRC62 0.90 BNILDI_08100 trpR trp operon repressor 1.00 BNILDI_11210 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_03668 Trp operon repressor 1.00 OHPLBJKB_01053 Glycine betaine/proline betaine-binding periplasmic protein low > 73
Escherichia coli ECRC102 0.90 NIAGMN_09015 trpR trp operon repressor 1.00 NIAGMN_18580 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX — —
Escherichia fergusonii Becca 0.90 EFB2_04051 Trp operon repressor 0.99 EFB2_01248 Glycine betaine/proline betaine-binding periplasmic protein low > 86
Escherichia coli ECOR38 0.88 HEPCGN_09170 trpR trp operon repressor 0.99 HEPCGN_20010 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 87
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3603 Trp operon repressor 0.85 EX28DRAFT_2765 ABC-type proline/glycine betaine transport systems, periplasmic components — —
Enterobacter sp. TBS_079 0.78 MPMX20_00700 Trp operon repressor 0.86 MPMX20_03560 Glycine betaine/proline betaine-binding periplasmic protein low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS04190 Trp operon repressor 0.87 BWI76_RS22075 glycine betaine ABC transporter substrate-binding protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF1061 Transcriptional repressor protein TrpR 0.86 GFF1589 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) low > 78
Erwinia tracheiphila SCR3 0.66 LU632_RS02580 trpR trp operon repressor 0.74 LU632_RS16830 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 74
Serratia liquefaciens MT49 0.59 IAI46_02990 trp operon repressor 0.77 IAI46_19965 glycine betaine/L-proline ABC transporter substrate-binding protein ProX — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS02755 trp operon repressor 0.75 HER17_RS04495 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 75
Dickeya dadantii 3937 0.54 DDA3937_RS18450 trp operon repressor 0.77 DDA3937_RS16730 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 74
Dickeya dianthicola 67-19 0.53 HGI48_RS18380 trp operon repressor 0.78 HGI48_RS16810 glycine betaine/L-proline ABC transporter substrate-binding protein ProX — —
Dickeya dianthicola ME23 0.53 DZA65_RS19520 trp operon repressor 0.77 DZA65_RS17885 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 75
Rahnella sp. WP5 0.51 EX31_RS03980 trp operon repressor 0.77 EX31_RS13625 glycine betaine/L-proline ABC transporter substrate-binding protein ProX 0.50 53

Not shown: 0 genomes with orthologs for ECD_04269 only; 8 genomes with orthologs for ECD_02535 only