Conservation of cofitness between ECD_00332 and ECD_02516 in Escherichia coli BL21

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00332 diguanylate cyclase, cellulose regualtor 1.0 ECD_02516 L-2-hydroxyglutarate oxidase 0.34 23
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02340 diguanylate cyclase AdrA 0.99 ECOLIN_RS14835 L-2-hydroxyglutarate oxidase low > 55
Escherichia coli BW25113 1.00 b0385 yaiC predicted diguanylate cyclase (NCBI) 0.99 b2660 ygaF orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_07255 adrA diguanylate cyclase AdrA 0.99 HEPCGN_20145 lhgO L-2-hydroxyglutarate oxidase low > 87
Escherichia coli ECRC102 1.00 NIAGMN_06670 adrA diguanylate cyclase AdrA 0.99 NIAGMN_18685 lhgO L-2-hydroxyglutarate oxidase — —
Escherichia coli ECRC99 1.00 KEDOAH_19350 adrA diguanylate cyclase AdrA 0.99 KEDOAH_07220 lhgO L-2-hydroxyglutarate oxidase — —
Escherichia coli ECRC98 1.00 JDDGAC_12270 adrA diguanylate cyclase AdrA 0.99 JDDGAC_24580 lhgO L-2-hydroxyglutarate oxidase low > 86
Escherichia coli ECRC101 1.00 MCAODC_27840 adrA diguanylate cyclase AdrA 0.99 MCAODC_11440 lhgO L-2-hydroxyglutarate oxidase low > 87
Escherichia coli ECRC100 1.00 OKFHMN_08615 adrA diguanylate cyclase AdrA 0.99 OKFHMN_20920 lhgO L-2-hydroxyglutarate oxidase low > 80
Escherichia coli ECOR27 1.00 NOLOHH_01540 adrA diguanylate cyclase AdrA 0.96 NOLOHH_12745 lhgO L-2-hydroxyglutarate oxidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03289 putative diguanylate cyclase DgcC 1.00 OHPLBJKB_01072 L-2-hydroxyglutarate oxidase LhgO low > 73
Escherichia coli ECRC62 0.99 BNILDI_22955 adrA diguanylate cyclase AdrA 0.99 BNILDI_11305 lhgO L-2-hydroxyglutarate oxidase 0.50 59
Escherichia fergusonii Becca 0.99 EFB2_03671 putative diguanylate cyclase DgcC 0.99 EFB2_01270 L-2-hydroxyglutarate dehydrogenase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF4282 Protein YaiC 0.87 GFF1565 L-2-hydroxyglutarate oxidase (EC 1.1.3.15) low > 78
Pseudomonas putida KT2440 0.35 PP_1155 YaiC/YhcK/ArdA family protein 0.67 PP_2910 L-2-hydroxyglutarate oxidase low > 96
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS14650 diguanylate cyclase 0.12 QEN71_RS00575 NAD(P)/FAD-dependent oxidoreductase — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_01080 histidine kinase 0.14 AO356_26445 FAD-dependent oxidoreductase low > 104
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS21525 hypothetical protein 0.15 RR42_RS06495 FAD-dependent oxidoreductase low > 128
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS16875 diguanylate cyclase 0.36 HSERO_RS21645 hydroxyglutarate oxidase low > 78

Not shown: 18 genomes with orthologs for ECD_00332 only; 18 genomes with orthologs for ECD_02516 only