Conservation of cofitness between ECD_02735 and ECD_02395 in Escherichia coli BL21

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex 1.0 ECD_02395 cyclic-di-GMP phosphodiesterase, anaerobic low > 61
Escherichia coli ECRC62 1.00 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase 0.99 BNILDI_12250 pdeF cyclic-guanylate-specific phosphodiesterase PdeF low > 75
Escherichia coli BW25113 1.00 b2903 gcvP glycine dehydrogenase (NCBI) 1.00 b2503 yfgF predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase 0.99 KEDOAH_06430 pdeF cyclic-guanylate-specific phosphodiesterase PdeF — —
Escherichia coli ECRC100 1.00 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase 0.99 OKFHMN_21790 pdeF cyclic-guanylate-specific phosphodiesterase PdeF low > 80
Escherichia coli ECRC98 1.00 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase 0.99 JDDGAC_25735 pdeF cyclic-guanylate-specific phosphodiesterase PdeF low > 86
Escherichia coli ECRC101 1.00 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase 0.99 MCAODC_12320 pdeF cyclic-guanylate-specific phosphodiesterase PdeF low > 87
Escherichia coli ECRC102 1.00 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase 0.99 NIAGMN_19560 pdeF cyclic-guanylate-specific phosphodiesterase PdeF — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase 0.99 ECOLIN_RS14210 cyclic-guanylate-specific phosphodiesterase PdeF low > 55
Escherichia fergusonii Becca 0.99 EFB2_00999 Glycine dehydrogenase (decarboxylating) 0.99 EFB2_01395 Cyclic di-GMP phosphodiesterase PdeF low > 86
Escherichia coli ECOR27 0.99 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase 1.00 NOLOHH_13440 pdeF cyclic-guanylate-specific phosphodiesterase PdeF low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.72 GFF2165 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_03762 Glycine dehydrogenase (decarboxylating) 0.62 MPMX20_03358 Cyclic di-GMP phosphodiesterase PdeF low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.57 BWI76_RS21005 sensor domain-containing phosphodiesterase low > 92
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) 0.63 EX28DRAFT_0164 FOG: EAL domain low > 76
Serratia liquefaciens MT49 0.81 IAI46_20850 aminomethyl-transferring glycine dehydrogenase 0.39 IAI46_18925 sensor domain-containing phosphodiesterase low > 86
Rahnella sp. WP5 0.81 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase 0.43 EX31_RS22670 sensor domain-containing phosphodiesterase low > 89

Not shown: 69 genomes with orthologs for ECD_02735 only; 0 genomes with orthologs for ECD_02395 only