Conservation of cofitness between ECD_00291 and ECD_02395 in Escherichia coli BL21

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00291 cytosine/isoguanine deaminase 1.0 ECD_02395 cyclic-di-GMP phosphodiesterase, anaerobic 0.65 12
Escherichia coli BW25113 1.00 b0337 codA cytosine deaminase (NCBI) 1.00 b2503 yfgF predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_01745 codA cytosine/isoguanine deaminase 1.00 NOLOHH_13440 pdeF cyclic-guanylate-specific phosphodiesterase PdeF low > 75
Escherichia coli ECRC62 0.99 BNILDI_23160 codA cytosine/isoguanine deaminase 0.99 BNILDI_12250 pdeF cyclic-guanylate-specific phosphodiesterase PdeF low > 75
Escherichia coli ECRC99 0.99 KEDOAH_19120 codA cytosine/isoguanine deaminase 0.99 KEDOAH_06430 pdeF cyclic-guanylate-specific phosphodiesterase PdeF — —
Escherichia coli ECRC101 0.99 MCAODC_28075 codA cytosine/isoguanine deaminase 0.99 MCAODC_12320 pdeF cyclic-guanylate-specific phosphodiesterase PdeF low > 87
Escherichia coli ECRC102 0.99 NIAGMN_06900 codA cytosine/isoguanine deaminase 0.99 NIAGMN_19560 pdeF cyclic-guanylate-specific phosphodiesterase PdeF — —
Escherichia coli ECRC98 0.99 JDDGAC_12500 codA cytosine/isoguanine deaminase 0.99 JDDGAC_25735 pdeF cyclic-guanylate-specific phosphodiesterase PdeF low > 86
Escherichia coli ECRC100 0.99 OKFHMN_08845 codA cytosine/isoguanine deaminase 0.99 OKFHMN_21790 pdeF cyclic-guanylate-specific phosphodiesterase PdeF low > 80
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02175 cytosine/isoguanine deaminase 0.99 ECOLIN_RS14210 cyclic-guanylate-specific phosphodiesterase PdeF low > 55
Escherichia fergusonii Becca 0.99 EFB2_03701 Cytosine deaminase 0.99 EFB2_01395 Cyclic di-GMP phosphodiesterase PdeF low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2960 Cytosine deaminase (EC 3.5.4.1) 0.72 GFF2165 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) low > 78
Serratia liquefaciens MT49 0.83 IAI46_23650 cytosine deaminase 0.39 IAI46_18925 sensor domain-containing phosphodiesterase low > 86
Rahnella sp. WP5 0.81 EX31_RS04665 cytosine deaminase 0.43 EX31_RS22670 sensor domain-containing phosphodiesterase low > 89
Enterobacter asburiae PDN3 0.77 EX28DRAFT_4163 Cytosine deaminase and related metal-dependent hydrolases 0.63 EX28DRAFT_0164 FOG: EAL domain low > 76
Klebsiella michiganensis M5al 0.77 BWI76_RS26030 cytosine deaminase 0.57 BWI76_RS21005 sensor domain-containing phosphodiesterase low > 92
Enterobacter sp. TBS_079 0.77 MPMX20_04268 Cytosine deaminase 0.62 MPMX20_03358 Cyclic di-GMP phosphodiesterase PdeF low > 85

Not shown: 40 genomes with orthologs for ECD_00291 only; 0 genomes with orthologs for ECD_02395 only