Conservation of cofitness between ECD_00806 and ECD_01625 in Escherichia coli BL21

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00806 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a 1.0 ECD_01625 murein DD-endopeptidase, space-maker hydrolase 0.40 33
Escherichia coli BW25113 1.00 b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) 1.00 b1655 ydhO predicted lipoprotein (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC 1.00 OHPLBJKB_02070 Murein DD-endopeptidase MepH low > 73
Escherichia coli ECOR27 1.00 NOLOHH_22410 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.95 NOLOHH_17930 mepH Murein DD-endopeptidase MepH low > 75
Escherichia coli ECRC102 1.00 NIAGMN_04085 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 NIAGMN_00655 mepH peptidoglycan DD-endopeptidase MepH — —
Escherichia coli ECRC99 1.00 KEDOAH_21870 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 KEDOAH_00700 mepH peptidoglycan DD-endopeptidase MepH — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04460 serine-type D-Ala-D-Ala carboxypeptidase 0.99 ECOLIN_RS09225 peptidoglycan DD-endopeptidase MepH — —
Escherichia coli ECRC100 1.00 OKFHMN_06040 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 OKFHMN_27410 mepH peptidoglycan DD-endopeptidase MepH low > 80
Escherichia coli ECRC98 1.00 JDDGAC_09675 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 JDDGAC_02000 mepH peptidoglycan DD-endopeptidase MepH low > 86
Escherichia coli ECOR38 1.00 HEPCGN_01990 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.94 HEPCGN_05795 mepH peptidoglycan DD-endopeptidase MepH low > 87
Escherichia coli ECRC62 1.00 BNILDI_20670 dacC serine-type D-Ala-D-Ala carboxypeptidase 1.00 BNILDI_16720 mepH peptidoglycan DD-endopeptidase MepH low > 75
Escherichia coli ECRC101 1.00 MCAODC_25255 dacC serine-type D-Ala-D-Ala carboxypeptidase 0.99 MCAODC_18000 mepH peptidoglycan DD-endopeptidase MepH low > 87
Escherichia fergusonii Becca 1.00 EFB2_03267 D-alanyl-D-alanine carboxypeptidase DacC 0.98 EFB2_02338 Murein DD-endopeptidase MepH low > 86
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase 0.65 EX28DRAFT_1652 Cell wall-associated hydrolases (invasion-associated proteins) low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_01477 D-alanyl-D-alanine carboxypeptidase DacC 0.63 MPMX20_01982 Murein DD-endopeptidase MepH low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF744 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.67 GFF3620 FIG00545237: hypothetical protein low > 78
Klebsiella michiganensis M5al 0.85 BWI76_RS09145 serine-type D-Ala-D-Ala carboxypeptidase 0.63 BWI76_RS16495 endopeptidase low > 92
Pectobacterium carotovorum WPP14 0.72 HER17_RS12545 serine hydrolase 0.47 HER17_RS09245 NlpC/P60 family protein low > 75
Serratia liquefaciens MT49 0.71 IAI46_08285 serine hydrolase 0.48 IAI46_11255 C40 family peptidase low > 86
Rahnella sp. WP5 0.65 EX31_RS09695 D-alanyl-D-alanine carboxypeptidase 0.49 EX31_RS13825 C40 family peptidase low > 89

Not shown: 54 genomes with orthologs for ECD_00806 only; 1 genomes with orthologs for ECD_01625 only