Conservation of cofitness between ECD_00346 and ECD_01435 in Escherichia coli BL21

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00346 exonuclease, dsDNA, ATP-dependent 1.0 ECD_01435 putative DNA-binding transcriptional regulator 0.54 57
Escherichia coli BW25113 1.00 b0398 sbcD exonuclease, dsDNA, ATP-dependent (NCBI) 1.00 b1477 yddM predicted DNA-binding transcriptional regulator (RefSeq) — —
Escherichia coli ECRC98 1.00 JDDGAC_12205 sbcD exonuclease subunit SbcD 0.98 JDDGAC_03860 yddM HigA family addiction module antitoxin low > 86
Escherichia coli ECRC62 1.00 BNILDI_22895 sbcD exonuclease subunit SbcD 1.00 BNILDI_17530 yddM HigA family addiction module antitoxin low > 75
Escherichia coli ECRC101 1.00 MCAODC_27775 sbcD exonuclease subunit SbcD 0.98 MCAODC_16570 yddM HigA family addiction module antitoxin low > 87
Escherichia coli ECRC102 1.00 NIAGMN_06605 sbcD exonuclease subunit SbcD 0.98 NIAGMN_25500 yddM HigA family addiction module antitoxin — —
Escherichia coli ECRC100 1.00 OKFHMN_08550 sbcD exonuclease subunit SbcD 0.98 OKFHMN_01370 yddM HigA family addiction module antitoxin low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03278 Nuclease SbcCD subunit D 1.00 OHPLBJKB_02240 putative HTH-type transcriptional regulator YddM — —
Escherichia coli ECRC99 1.00 KEDOAH_19415 sbcD exonuclease subunit SbcD 0.98 KEDOAH_27070 yddM HigA family addiction module antitoxin — —
Escherichia coli ECOR27 1.00 NOLOHH_01480 sbcD exonuclease subunit SbcD 1.00 NOLOHH_19045 yddM HigA family addiction module antitoxin low > 75
Escherichia fergusonii Becca 0.99 EFB2_03659 Nuclease SbcCD subunit D 1.00 EFB2_02516 putative HTH-type transcriptional regulator YddM — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02405 exonuclease subunit SbcD 1.00 ECOLIN_RS08510 HigA family addiction module antitoxin — —
Escherichia coli ECOR38 0.99 HEPCGN_07190 sbcD exonuclease subunit SbcD 1.00 HEPCGN_26415 yddM HigA family addiction module antitoxin — —
Pseudomonas simiae WCS417 0.22 PS417_15115 exonuclease SbcD 0.31 PS417_23005 XRE family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS17135 exonuclease subunit SbcD 0.31 PFLU_RS24670 HigA family addiction module antidote protein low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS17135 exonuclease subunit SbcD 0.31 PFLU_RS24670 HigA family addiction module antidote protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_4633 Exonuclease SbcD 0.30 Pf1N1B4_2758 HigA protein (antitoxin to HigB) — —
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_23680 exonuclease SbcD 0.26 AO353_13925 XRE family transcriptional regulator low > 101

Not shown: 28 genomes with orthologs for ECD_00346 only; 4 genomes with orthologs for ECD_01435 only