Conservation of cofitness between ECD_02276 and ECD_01245 in Escherichia coli BL21

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02276 D-serine dehydratase 1.0 ECD_01245 23S rRNA pseudouridine(2605) synthase 0.82 1
Escherichia coli ECRC62 1.00 BNILDI_12985 dsdA D-serine ammonia-lyase 0.99 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01355 D-serine dehydratase 1.00 OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B low > 73
Escherichia coli BW25113 1.00 b2366 dsdA D-serine dehydratase (NCBI) 1.00 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_14130 dsdA D-serine ammonia-lyase 0.99 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 75
Escherichia coli ECRC102 0.99 NIAGMN_20225 dsdA D-serine ammonia-lyase 0.99 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC98 0.99 JDDGAC_26410 dsdA D-serine ammonia-lyase 0.99 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 86
Escherichia coli ECRC100 0.99 OKFHMN_22450 dsdA D-serine ammonia-lyase 0.99 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 80
Escherichia coli ECRC99 0.99 KEDOAH_05775 dsdA D-serine ammonia-lyase 0.99 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC101 0.99 MCAODC_12980 dsdA D-serine ammonia-lyase 0.99 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Escherichia fergusonii Becca 0.99 EFB2_04196 D-serine dehydratase 1.00 EFB2_02658 Ribosomal large subunit pseudouridine synthase B low > 86
Escherichia coli ECOR38 0.99 HEPCGN_21655 dsdA D-serine ammonia-lyase 1.00 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS13620 D-serine ammonia-lyase 1.00 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB low > 55
Klebsiella michiganensis M5al 0.87 BWI76_RS27860 D-serine dehydratase 0.91 BWI76_RS11880 23S rRNA pseudouridylate synthase B low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF293 D-serine dehydratase (EC 4.3.1.18) 0.98 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) low > 78
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3966 D-serine ammonia-lyase (EC 4.3.1.18) 0.91 EX28DRAFT_0940 pseudouridine synthase 0.59 42
Enterobacter sp. TBS_079 0.81 MPMX20_00023 D-serine dehydratase 0.95 MPMX20_02507 Ribosomal large subunit pseudouridine synthase B low > 85
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_18510 D-serine dehydratase 0.66 CSW01_05970 23S rRNA pseudouridylate synthase B — —
Serratia liquefaciens MT49 0.69 IAI46_12905 D-serine ammonia-lyase 0.86 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB low > 86
Dickeya dianthicola 67-19 0.58 HGI48_RS21080 D-serine ammonia-lyase 0.82 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB low > 71
Dickeya dadantii 3937 0.57 DDA3937_RS00280 D-serine ammonia-lyase 0.82 DDA3937_RS10500 23S rRNA pseudouridine(2605) synthase RluB low > 74

Not shown: 8 genomes with orthologs for ECD_02276 only; 12 genomes with orthologs for ECD_01245 only