Conservation of cofitness between ECD_00811 and ECD_00864 in Escherichia coli BL21

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00811 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis 1.0 ECD_00864 23S rRNA m(5)U747 methyltransferase, SAM-dependent 0.47 11
Escherichia coli BW25113 1.00 b0844 b0844 orf, hypothetical protein (VIMSS) 0.98 b0859 rumB 23S rRNA m(5)U747-methyltransferase (NCBI) low > 76
Escherichia fergusonii Becca 0.99 EFB2_03262 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI 0.99 EFB2_03202 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04485 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase 0.99 ECOLIN_RS04575 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Escherichia coli ECRC62 0.99 BNILDI_20645 ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase 0.99 BNILDI_20560 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02866 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI 1.00 OHPLBJKB_02809 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 73
Escherichia coli ECOR27 0.99 NOLOHH_22385 ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase 0.99 NOLOHH_22305 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 57
Escherichia coli ECOR38 0.99 HEPCGN_02015 ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase 0.99 HEPCGN_02095 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 85
Escherichia coli ECRC101 0.98 MCAODC_25230 ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase 0.99 MCAODC_25150 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Escherichia coli ECRC101 0.98 OKFHMN_06015 ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase 0.99 OKFHMN_05935 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Escherichia coli ECRC102 0.98 NIAGMN_04060 ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase 0.99 NIAGMN_03980 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Escherichia coli ECRC98 0.98 JDDGAC_09650 ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase 0.99 JDDGAC_09570 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Escherichia coli ECRC99 0.98 KEDOAH_21895 ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase 0.99 KEDOAH_21975 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF748 Protein ybjI 0.90 GFF763 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) low > 78
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2122 HAD-superfamily hydrolase, subfamily IIB 0.87 EX28DRAFT_2094 23S rRNA (uracil-5-)-methyltransferase RumB low > 76
Enterobacter sp. TBS_079 0.73 MPMX20_01482 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI 0.88 MPMX20_01500 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 85
Klebsiella michiganensis M5al 0.71 BWI76_RS09165 phosphatase YbjI 0.82 BWI76_RS09485 23S rRNA (uracil(747)-C(5))-methyltransferase low > 92
Rahnella sp. WP5 0.46 EX31_RS01060 HAD family hydrolase 0.77 EX31_RS09605 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 89
Pectobacterium carotovorum WPP14 0.19 HER17_RS09150 HAD-IIB family hydrolase 0.73 HER17_RS12475 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 75
Dickeya dadantii 3937 0.18 DDA3937_RS11780 HAD family phosphatase 0.72 DDA3937_RS09485 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 74

Not shown: 1 genomes with orthologs for ECD_00811 only; 10 genomes with orthologs for ECD_00864 only