Conservation of cofitness between ECD_01302 and ECD_00456 in Escherichia coli BL21

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01302 L-Ala-D/L-Glu epimerase 1.0 ECD_00456 glyoxylate-inducible transcriptional repressor of all and gcl operons 0.67 15
Escherichia coli BW25113 1.00 b1325 ycjG putative muconate cycloisomerase I (EC 5.5.-.-) (VIMSS) 1.00 b0506 allR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02357 L-Ala-D/L-Glu epimerase 1.00 OHPLBJKB_03174 HTH-type transcriptional repressor AllR low > 73
Escherichia coli ECOR27 1.00 NOLOHH_19990 ycjG L-Ala-D/L-Glu epimerase 1.00 NOLOHH_00910 allR HTH-type transcriptional repressor AllR low > 57
Escherichia coli ECRC98 0.99 JDDGAC_04840 ycjG L-Ala-D/L-Glu epimerase 1.00 JDDGAC_11575 allR HTH-type transcriptional repressor AllR — —
Escherichia coli ECRC99 0.99 KEDOAH_26480 ycjG L-Ala-D/L-Glu epimerase 1.00 KEDOAH_20040 allR HTH-type transcriptional repressor AllR — —
Escherichia coli ECRC102 0.99 NIAGMN_26465 ycjG L-Ala-D/L-Glu epimerase 1.00 NIAGMN_05980 allR HTH-type transcriptional repressor AllR — —
Escherichia coli ECRC101 0.99 MCAODC_15975 ycjG L-Ala-D/L-Glu epimerase 1.00 MCAODC_27145 allR HTH-type transcriptional repressor AllR — —
Escherichia fergusonii Becca 0.99 EFB2_02602 L-Ala-D/L-Glu epimerase 1.00 EFB2_03555 HTH-type transcriptional repressor AllR low > 86
Escherichia coli ECRC101 0.99 OKFHMN_02295 ycjG L-Ala-D/L-Glu epimerase 1.00 OKFHMN_07930 allR HTH-type transcriptional repressor AllR — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS07955 L-Ala-D/L-Glu epimerase 1.00 ECOLIN_RS02950 HTH-type transcriptional repressor AllR — —
Escherichia coli ECOR38 0.99 HEPCGN_25895 ycjG L-Ala-D/L-Glu epimerase 1.00 HEPCGN_06565 allR HTH-type transcriptional repressor AllR low > 85
Escherichia coli ECRC62 0.99 BNILDI_18140 ycjG L-Ala-D/L-Glu epimerase 1.00 BNILDI_22340 allR HTH-type transcriptional repressor AllR — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF2677 L-alanine-DL-glutamate epimerase 0.87 GFF4422 Negative regulator of allantoin and glyoxylate utilization operons low > 78
Klebsiella michiganensis M5al 0.79 BWI76_RS12500 dipeptide epimerase 0.83 BWI76_RS06985 transcriptional regulator — —
Rahnella sp. WP5 0.67 EX31_RS06345 L-Ala-D/L-Glu epimerase 0.72 EX31_RS04595 HTH-type transcriptional repressor AllR low > 89
Pseudomonas fluorescens FW300-N2E3 0.09 AO353_23515 muconate cycloisomerase 0.17 AO353_23155 IclR family transcriptional regulator low > 101

Not shown: 38 genomes with orthologs for ECD_01302 only; 3 genomes with orthologs for ECD_00456 only