Conservation of cofitness between ECD_04269 and ECD_00413 in Escherichia coli BL21

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04269 transcriptional repressor, tryptophan-binding 1.0 ECD_00413 multidrug efflux system protein low > 61
Escherichia coli Nissle 1917 1.00 ECOLIN_RS25215 trp operon repressor 1.00 ECOLIN_RS02750 efflux RND transporter permease AcrB low > 55
Escherichia coli BW25113 1.00 b4393 trpR Trp operon repressor (NCBI) 1.00 b0462 acrB multidrug efflux system protein (NCBI) low > 76
Escherichia coli ECRC100 0.90 OKFHMN_11165 trpR trp operon repressor 1.00 OKFHMN_08205 acrB efflux RND transporter permease AcrB low > 80
Escherichia coli ECOR27 0.90 NOLOHH_03495 trpR trp operon repressor 1.00 NOLOHH_01140 acrB efflux RND transporter permease AcrB low > 75
Escherichia coli ECRC62 0.90 BNILDI_08100 trpR trp operon repressor 1.00 BNILDI_22555 acrB efflux RND transporter permease AcrB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_03668 Trp operon repressor 1.00 OHPLBJKB_03212 Multidrug efflux pump subunit AcrB low > 73
Escherichia coli ECRC101 0.90 MCAODC_01680 trpR trp operon repressor 1.00 MCAODC_27430 acrB efflux RND transporter permease AcrB low > 87
Escherichia coli ECRC102 0.90 NIAGMN_09015 trpR trp operon repressor 1.00 NIAGMN_06260 acrB efflux RND transporter permease AcrB — —
Escherichia coli ECRC99 0.90 KEDOAH_16990 trpR trp operon repressor 1.00 KEDOAH_19760 acrB efflux RND transporter permease AcrB — —
Escherichia fergusonii Becca 0.90 EFB2_04051 Trp operon repressor 1.00 EFB2_03596 Multidrug efflux pump subunit AcrB low > 86
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3603 Trp operon repressor 0.92 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family — —
Escherichia coli ECOR38 0.88 HEPCGN_09170 trpR trp operon repressor 1.00 HEPCGN_06820 acrB efflux RND transporter permease AcrB low > 87
Klebsiella michiganensis M5al 0.78 BWI76_RS04190 Trp operon repressor 0.91 BWI76_RS06775 multidrug efflux RND transporter permease subunit — —
Enterobacter sp. TBS_079 0.78 MPMX20_00700 Trp operon repressor 0.92 MPMX20_01064 Multidrug efflux pump subunit AcrB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF1061 Transcriptional repressor protein TrpR 0.94 GFF4379 RND efflux system, inner membrane transporter CmeB low > 78
Erwinia tracheiphila SCR3 0.66 LU632_RS02580 trpR trp operon repressor 0.82 LU632_RS18185 efflux RND transporter permease subunit — —
Serratia liquefaciens MT49 0.59 IAI46_02990 trp operon repressor 0.80 IAI46_05185 multidrug efflux RND transporter permease subunit SdeY — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS02755 trp operon repressor 0.80 HER17_RS15740 multidrug efflux RND transporter permease subunit low > 75
Dickeya dadantii 3937 0.54 DDA3937_RS18450 trp operon repressor 0.78 DDA3937_RS05735 multidrug efflux RND transporter permease subunit low > 74
Dickeya dianthicola 67-19 0.53 HGI48_RS18380 trp operon repressor 0.77 HGI48_RS05790 multidrug efflux RND transporter permease subunit — —
Dickeya dianthicola ME23 0.53 DZA65_RS19520 trp operon repressor 0.77 DZA65_RS06115 multidrug efflux RND transporter permease subunit low > 75
Rahnella sp. WP5 0.51 EX31_RS03980 trp operon repressor 0.85 EX31_RS22470 multidrug efflux RND transporter permease subunit low > 89

Not shown: 1 genomes with orthologs for ECD_04269 only; 52 genomes with orthologs for ECD_00413 only