Conservation of cofitness between ECD_00977 and ECD_00338 in Escherichia coli BL21

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00977 hydrogenase 1, b-type cytochrome subunit 1.0 ECD_00338 UPF0345 family protein 0.45 2
Escherichia coli ECRC98 1.00 JDDGAC_08410 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 JDDGAC_12240 ppnP pyrimidine/purine nucleoside phosphorylase — —
Escherichia coli ECRC99 1.00 KEDOAH_22945 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 KEDOAH_19380 ppnP pyrimidine/purine nucleoside phosphorylase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02692 putative Ni/Fe-hydrogenase 1 B-type cytochrome subunit 1.00 OHPLBJKB_03283 Pyrimidine/purine nucleoside phosphorylase 0.37 50
Escherichia coli ECRC62 1.00 BNILDI_19870 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 BNILDI_22925 ppnP pyrimidine/purine nucleoside phosphorylase — —
Escherichia coli ECRC101 1.00 MCAODC_24185 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 MCAODC_27810 ppnP pyrimidine/purine nucleoside phosphorylase — —
Escherichia coli ECOR38 1.00 HEPCGN_23370 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 HEPCGN_07225 ppnP pyrimidine/purine nucleoside phosphorylase low > 85
Escherichia coli BW25113 1.00 b0974 hyaC hydrogenase 1, b-type cytochrome subunit (NCBI) 1.00 b0391 yaiE hypothetical protein (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_23050 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 NIAGMN_06640 ppnP pyrimidine/purine nucleoside phosphorylase — —
Escherichia coli ECRC101 1.00 OKFHMN_04800 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 OKFHMN_08585 ppnP pyrimidine/purine nucleoside phosphorylase — —
Escherichia coli ECOR27 1.00 NOLOHH_21705 hyaC Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 NOLOHH_01510 ppnP pyrimidine/purine nucleoside phosphorylase low > 57
Escherichia fergusonii Becca 0.99 EFB2_03097 putative Ni/Fe-hydrogenase 1 B-type cytochrome subunit 1.00 EFB2_03665 Pyrimidine/purine nucleoside phosphorylase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS05120 Ni/Fe-hydrogenase b-type cytochrome subunit 1.00 ECOLIN_RS02375 pyrimidine/purine nucleoside phosphorylase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF2789 Ni,Fe-hydrogenase I cytochrome b subunit 0.88 GFF4289 Cytoplasmic protein YaiE low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2227 Ni,Fe-hydrogenase I cytochrome b subunit 0.38 GFF295 FIG074102: hypothetical protein — —
Variovorax sp. OAS795 0.48 ABID97_RS13670 Ni/Fe-hydrogenase, b-type cytochrome subunit 0.34 ABID97_RS21665 pyrimidine/purine nucleoside phosphorylase — —
Shewanella oneidensis MR-1 0.15 SO2097 hydC quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (NCBI ptt file) 0.38 SO4467 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.14 Shewana3_1878 Ni/Fe-hydrogenase, b-type cytochrome subunit (RefSeq) 0.37 Shewana3_0263 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.13 Sama_1677 quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (RefSeq) 0.41 Sama_3424 hypothetical protein (RefSeq) low > 62

Not shown: 4 genomes with orthologs for ECD_00977 only; 45 genomes with orthologs for ECD_00338 only