Conservation of cofitness between CSW01_08080 and CSW01_08085 in Vibrio cholerae E7946 ATCC 55056

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08080 HlyD family secretion protein 1.0 CSW01_08085 ABC transporter permease 0.45 20
Pectobacterium carotovorum WPP14 0.59 HER17_RS19365 efflux RND transporter periplasmic adaptor subunit 0.31 HER17_RS19370 ABC transporter permease low > 75
Shewanella sp. ANA-3 0.58 Shewana3_3639 secretion protein HlyD family protein (RefSeq) 0.27 Shewana3_3638 ABC-2 type transporter (RefSeq) 0.74 3
Shewanella oneidensis MR-1 0.58 SO4089 HlyD family secretion protein (NCBI ptt file) 0.28 SO4088 conserved hypothetical protein (NCBI ptt file) 0.90 1
Shewanella amazonensis SB2B 0.54 Sama_0478 HlyD family secretion protein (RefSeq) 0.25 Sama_0479 hypothetical protein (RefSeq) 0.98 3
Shewanella loihica PV-4 0.54 Shew_0412 secretion protein HlyD family protein (RefSeq) 0.26 Shew_0413 ABC-2 type transporter (RefSeq) 0.58 3
Acidovorax sp. GW101-3H11 0.43 Ac3H11_502 Membrane-fusion protein 0.21 Ac3H11_501 ABC-type multidrug transport system, permease component 0.60 3
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS02180 efflux RND transporter periplasmic adaptor subunit 0.15 HMPREF1058_RS02185 ABC transporter permease 0.63 3
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS01370 efflux RND transporter periplasmic adaptor subunit 0.15 ABI39_RS01375 ABC transporter permease 0.41 21
Variovorax sp. SCN45 0.40 GFF1141 Membrane-fusion protein 0.22 GFF1140 Domain of unknown function / Efflux ABC transporter, permease protein low > 127
Bacteroides thetaiotaomicron VPI-5482 0.38 BT3904 conserved hypothetical protein (NCBI ptt file) 0.17 BT3903 conserved hypothetical protein (NCBI ptt file) 0.81 2
Bacteroides ovatus ATCC 8483 0.37 BACOVA_01127 auxiliary transport protein, membrane fusion protein (MFP) family protein 0.17 BACOVA_01126 ABC-2 type transporter 0.90 3
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF4708 Membrane-fusion protein 0.23 GFF4707 ABC-type multidrug transport system, permease component low > 90
Bacteroides stercoris CC31F 0.37 HMPREF1181_RS06670 HlyD family efflux transporter periplasmic adaptor subunit 0.16 HMPREF1181_RS06675 ABC transporter permease 0.51 11
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS10220 efflux RND transporter periplasmic adaptor subunit 0.14 HMPREF1078_RS10095 ABC transporter permease low > 61
Sphingobium sp. HT1-2 0.34 GFF4735 HlyD family secretion protein 0.17 GFF5105 hypothetical protein low > 95
Acinetobacter baumannii LAC-4 0.33 RR41_RS04515 efflux RND transporter periplasmic adaptor subunit 0.13 RR41_RS04510 ABC transporter permease low > 55
Acinetobacter radioresistens SK82 0.30 MPMX26_02221 Colistin resistance protein EmrA 0.14 MPMX26_02222 hypothetical protein — —
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3862 Multidrug resistance efflux pump 0.14 Ga0059261_3863 ABC-type multidrug transport system, permease component low > 68
Pseudomonas aeruginosa PA14 0.26 IKLFDK_17460 secretion protein HlyD 0.11 IKLFDK_17455 antibiotic ABC transporter permease low > 98
Pseudomonas aeruginosa MRSN321 0.26 DY961_RS15925 efflux RND transporter periplasmic adaptor subunit 0.12 DY961_RS15930 ABC transporter permease low > 100
Pseudomonas aeruginosa PUPa3 0.26 DQ20_RS41155 efflux RND transporter periplasmic adaptor subunit 0.11 DQ20_RS41150 ABC transporter permease low > 101
Serratia liquefaciens MT49 0.25 IAI46_01990 efflux RND transporter periplasmic adaptor subunit 0.11 IAI46_01995 ABC transporter permease low > 87
Azospirillum sp. SherDot2 0.24 MPMX19_04494 p-hydroxybenzoic acid efflux pump subunit AaeA 0.15 MPMX19_04495 hypothetical protein low > 112

Not shown: 9 genomes with orthologs for CSW01_08080 only; 0 genomes with orthologs for CSW01_08085 only