Conservation of cofitness between CSW01_02100 and CSW01_04900 in Vibrio cholerae E7946 ATCC 55056

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02100 RNase E specificity factor CsrD 1.0 CSW01_04900 magnesium and cobalt efflux protein CorC 0.79 3
Serratia liquefaciens MT49 0.29 IAI46_22725 RNase E specificity factor CsrD 0.62 IAI46_06005 CNNM family magnesium/cobalt transport protein CorC low > 87
Dickeya dianthicola ME23 0.26 DZA65_RS01405 RNase E specificity factor CsrD 0.59 DZA65_RS06625 CNNM family magnesium/cobalt transport protein CorC low > 75
Dickeya dianthicola 67-19 0.26 HGI48_RS01345 RNase E specificity factor CsrD 0.59 HGI48_RS06280 CNNM family magnesium/cobalt transport protein CorC low > 71
Rahnella sp. WP5 0.26 EX31_RS12230 RNase E specificity factor CsrD 0.66 EX31_RS23185 CNNM family magnesium/cobalt transport protein CorC low > 89
Enterobacter asburiae PDN3 0.26 EX28DRAFT_3302 diguanylate cyclase (GGDEF) domain 0.63 EX28DRAFT_2313 Putative Mg2+ and Co2+ transporter CorC low > 76
Dickeya dadantii 3937 0.25 DDA3937_RS01425 RNase E specificity factor CsrD 0.60 DDA3937_RS06235 CNNM family magnesium/cobalt transport protein CorC low > 74
Escherichia coli ECOR38 0.25 HEPCGN_16585 csrD RNase E specificity factor CsrD 0.63 HEPCGN_00990 corC CNNM family magnesium/cobalt transport protein CorC — —
Escherichia coli ECRC62 0.25 BNILDI_02015 csrD RNase E specificity factor CsrD 0.63 BNILDI_21625 corC CNNM family magnesium/cobalt transport protein CorC low > 75
Escherichia coli ECRC98 0.25 JDDGAC_21345 csrD RNase E specificity factor CsrD 0.63 JDDGAC_10885 corC CNNM family magnesium/cobalt transport protein CorC low > 87
Escherichia coli ECRC102 0.25 NIAGMN_15480 csrD RNase E specificity factor CsrD 0.63 NIAGMN_05295 corC CNNM family magnesium/cobalt transport protein CorC low > 80
Escherichia coli Nissle 1917 0.25 ECOLIN_RS18635 RNase E specificity factor CsrD 0.63 ECOLIN_RS03540 CNNM family magnesium/cobalt transport protein CorC — —
Escherichia coli ECRC100 0.25 OKFHMN_17720 csrD RNase E specificity factor CsrD 0.63 OKFHMN_07240 corC CNNM family magnesium/cobalt transport protein CorC low > 79
Escherichia coli ECRC99 0.25 KEDOAH_10430 csrD RNase E specificity factor CsrD 0.63 KEDOAH_20730 corC CNNM family magnesium/cobalt transport protein CorC — —
Escherichia coli ECRC101 0.25 MCAODC_08240 csrD RNase E specificity factor CsrD 0.63 MCAODC_26455 corC CNNM family magnesium/cobalt transport protein CorC low > 87
Escherichia coli ECOR27 0.25 NOLOHH_09505 csrD RNase E specificity factor CsrD 0.63 NOLOHH_23620 corC CNNM family magnesium/cobalt transport protein CorC low > 75
Escherichia coli BL21 0.25 ECD_03111 targeting factor for csrBC sRNA degradation 0.63 ECD_00626 putative ion transport low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_00453 RNase E specificity factor CsrD 0.63 OHPLBJKB_03054 Magnesium and cobalt efflux protein CorC — —
Escherichia fergusonii Becca 0.25 EFB2_00579 RNase E specificity factor CsrD 0.63 EFB2_03441 Magnesium and cobalt efflux protein CorC low > 86
Escherichia coli BW25113 0.25 b3252 yhdA conserved inner membrane protein (NCBI) 0.63 b0658 ybeX predicteed ion transport (NCBI) low > 76
Enterobacter sp. TBS_079 0.25 MPMX20_04158 RNase E specificity factor CsrD 0.62 MPMX20_01308 Magnesium and cobalt efflux protein CorC low > 85

Not shown: 0 genomes with orthologs for CSW01_02100 only; 70 genomes with orthologs for CSW01_04900 only