Conservation of cofitness between CSW01_07825 and CSW01_02815 in Vibrio cholerae E7946 ATCC 55056

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07825 LacI family transcriptional regulator 1.0 CSW01_02815 tRNA pseudouridine(13) synthase TruD 0.43 13
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF1322 Galactose operon repressor, GalR-LacI family of transcriptional regulators 0.36 GFF4793 tRNA pseudouridine 13 synthase (EC 4.2.1.-) low > 78
Klebsiella pneumoniae MKP103 0.42 KDGMDA_03930 LacI family transcriptional regulator 0.36 KDGMDA_03240 tRNA pseudouridine(13) synthase TruD low > 95
Enterobacter sp. TBS_079 0.41 MPMX20_03704 HTH-type transcriptional regulator AscG 0.34 MPMX20_03631 tRNA pseudouridine synthase D low > 85
Klebsiella michiganensis M5al 0.41 BWI76_RS23355 LacI family transcriptional regulator 0.35 BWI76_RS22665 tRNA pseudouridine(13) synthase TruD low > 92
Enterobacter asburiae PDN3 0.41 EX28DRAFT_2915 Transcriptional regulators 0.36 EX28DRAFT_2841 tRNA pseudouridine synthase, TruD family low > 76
Serratia liquefaciens MT49 0.41 IAI46_20505 LacI family DNA-binding transcriptional regulator 0.39 IAI46_03765 tRNA pseudouridine(13) synthase TruD low > 87
Dickeya dadantii 3937 0.39 DDA3937_RS17420 LacI family DNA-binding transcriptional regulator 0.38 DDA3937_RS16890 tRNA pseudouridine(13) synthase TruD low > 74
Dickeya dianthicola ME23 0.39 DZA65_RS18545 LacI family transcriptional regulator 0.37 DZA65_RS18035 tRNA pseudouridine(13) synthase TruD low > 75
Dickeya dianthicola 67-19 0.38 HGI48_RS17450 LacI family DNA-binding transcriptional regulator 0.37 HGI48_RS16960 tRNA pseudouridine(13) synthase TruD low > 71
Pectobacterium carotovorum WPP14 0.38 HER17_RS03725 LacI family DNA-binding transcriptional regulator 0.36 HER17_RS04335 tRNA pseudouridine(13) synthase TruD low > 75
Escherichia coli ECOR27 0.35 NOLOHH_12470 ascG DNA-binding transcriptional regulator AscG 0.36 NOLOHH_12290 truD tRNA pseudouridine(13) synthase TruD low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_01020 HTH-type transcriptional regulator AscG 0.36 OHPLBJKB_00988 tRNA pseudouridine synthase D low > 74
Escherichia coli BL21 0.35 ECD_02564 asc operon transcriptional repressor; prpBC operon repressor 0.36 ECD_02595 tRNA(Glu) pseudouridine(13) synthase low > 61
Escherichia coli ECRC62 0.35 BNILDI_11030 ascG DNA-binding transcriptional regulator AscG 0.36 BNILDI_10840 truD tRNA pseudouridine(13) synthase TruD low > 75
Escherichia coli ECRC99 0.35 KEDOAH_07510 ascG DNA-binding transcriptional regulator AscG 0.36 KEDOAH_07665 truD tRNA pseudouridine(13) synthase TruD — —
Escherichia coli ECOR38 0.35 HEPCGN_19825 ascG DNA-binding transcriptional regulator AscG 0.36 HEPCGN_19655 truD tRNA pseudouridine(13) synthase TruD low > 88
Escherichia coli ECRC101 0.35 MCAODC_11150 ascG DNA-binding transcriptional regulator AscG 0.36 MCAODC_11000 truD tRNA pseudouridine(13) synthase TruD low > 87
Escherichia coli ECRC98 0.35 JDDGAC_24290 ascG DNA-binding transcriptional regulator AscG 0.36 JDDGAC_24140 truD tRNA pseudouridine(13) synthase TruD low > 87
Escherichia coli ECRC100 0.35 OKFHMN_20625 ascG DNA-binding transcriptional regulator AscG 0.36 OKFHMN_20475 truD tRNA pseudouridine(13) synthase TruD low > 79
Escherichia coli ECRC102 0.35 NIAGMN_18395 ascG DNA-binding transcriptional regulator AscG 0.36 NIAGMN_18245 truD tRNA pseudouridine(13) synthase TruD low > 80
Escherichia coli BW25113 0.35 b2714 ascG DNA-binding transcriptional repressor (NCBI) 0.36 b2745 truD tRNA pseudouridine synthase D (NCBI) low > 76
Pantoea agglomerans CFBP13505 P0401 0.32 PagCFBP13505_RS07895 LacI family DNA-binding transcriptional regulator 0.34 PagCFBP13505_RS16750 tRNA pseudouridine(13) synthase TruD low > 74
Pantoea sp. MT58 0.31 IAI47_08235 LacI family DNA-binding transcriptional regulator 0.35 IAI47_04215 tRNA pseudouridine(13) synthase TruD low > 76
Erwinia amylovora T8 0.31 OLJFJH_07960 DNA-binding transcriptional regulator LacI/PurR family 0.37 OLJFJH_09360 tRNA pseudouridine(13) synthase TruD low > 58

Not shown: 4 genomes with orthologs for CSW01_07825 only; 42 genomes with orthologs for CSW01_02815 only