Conservation of cofitness between CSW01_01445 and CSW01_01440 in Vibrio cholerae E7946 ATCC 55056

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01445 lysine decarboxylase 1.0 CSW01_01440 lysine:cadaverine antiporter 0.92 1
Escherichia coli ECOR38 0.78 HEPCGN_11110 cadA lysine decarboxylase CadA 0.67 HEPCGN_11105 cadB cadaverine/lysine antiporter low > 88
Escherichia coli Nissle 1917 0.78 ECOLIN_RS23905 lysine decarboxylase CadA 0.67 ECOLIN_RS23910 cadaverine/lysine antiporter low > 55
Escherichia fergusonii Becca 0.78 EFB2_04451 Inducible lysine decarboxylase 0.67 EFB2_04450 putative cadaverine/lysine antiporter low > 86
Escherichia coli ECRC102 0.78 NIAGMN_10320 cadA lysine decarboxylase CadA 0.67 NIAGMN_10315 cadB cadaverine/lysine antiporter low > 80
Escherichia coli ECRC100 0.78 OKFHMN_12475 cadA lysine decarboxylase CadA 0.67 OKFHMN_12470 cadB cadaverine/lysine antiporter low > 79
Escherichia coli ECRC98 0.78 JDDGAC_16110 cadA lysine decarboxylase CadA 0.67 JDDGAC_16105 cadB cadaverine/lysine antiporter low > 87
Escherichia coli ECRC62 0.78 BNILDI_06750 cadA lysine decarboxylase CadA 0.67 BNILDI_06755 cadB cadaverine/lysine antiporter low > 75
Escherichia coli ECRC99 0.78 KEDOAH_15690 cadA lysine decarboxylase CadA 0.67 KEDOAH_15695 cadB cadaverine/lysine antiporter — —
Escherichia coli ECRC101 0.78 MCAODC_02985 cadA lysine decarboxylase CadA 0.67 MCAODC_02980 cadB cadaverine/lysine antiporter low > 88
Escherichia coli BW25113 0.78 b4131 cadA lysine decarboxylase 1 (NCBI) 0.67 b4132 cadB predicted lysine/cadaverine transporter (NCBI) 0.52 3
Escherichia coli ECOR27 0.78 NOLOHH_04740 cadA lysine decarboxylase CadA 0.67 NOLOHH_04735 cadB cadaverine/lysine antiporter low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03912 Inducible lysine decarboxylase 0.67 OHPLBJKB_03911 putative cadaverine/lysine antiporter low > 74
Escherichia coli BL21 0.78 ECD_04002 lysine decarboxylase, acid-inducible 0.67 ECD_04003 putative lysine/cadaverine transporter low > 61
Klebsiella michiganensis M5al 0.78 BWI76_RS07195 lysine decarboxylase CadA 0.69 BWI76_RS07190 lysine/cadaverine antiporter low > 92
Klebsiella pneumoniae MKP103 0.78 KDGMDA_15475 lysine decarboxylase CadA 0.69 KDGMDA_15470 cadaverine/lysine antiporter low > 95
Serratia liquefaciens MT49 0.77 IAI46_20145 lysine decarboxylase CadA 0.69 IAI46_20150 cadaverine/lysine antiporter 0.41 30
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2452 Lysine decarboxylase, inducible (EC 4.1.1.18) 0.69 GFF2451 Lysine/cadaverine antiporter membrane protein CadB low > 78
Pseudomonas aeruginosa PA14 0.39 IKLFDK_08840 lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA 0.26 IKLFDK_08845 amino acid permease low > 100
Pseudomonas sp. S08-1 0.39 OH686_03560 Lysine decarboxylase, inducible 0.26 OH686_03555 Lysine/cadaverine antiporter membrane protein CadB low > 80

Not shown: 39 genomes with orthologs for CSW01_01445 only; 3 genomes with orthologs for CSW01_01440 only