Conservation of cofitness between CSW01_09150 and CSW01_00015 in Vibrio cholerae E7946 ATCC 55056

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09150 AraC family transcriptional regulator 1.0 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.78 8
Rahnella sp. WP5 0.34 EX31_RS14690 helix-turn-helix transcriptional regulator 0.75 EX31_RS06000 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 89
Escherichia coli BW25113 0.32 b2382 ypdC predicted DNA-binding protein (NCBI) 0.76 b3706 trmE tRNA modification GTPase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_01339 HTH-type transcriptional activator RhaR 0.76 OHPLBJKB_04346 tRNA modification GTPase MnmE — —
Escherichia coli Nissle 1917 0.32 ECOLIN_RS13705 AraC family transcriptional regulator 0.76 ECOLIN_RS21345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 55
Escherichia coli ECRC62 0.32 BNILDI_12895 ypdC Uncharacterized HTH-type transcriptional regulator YpdC 0.76 BNILDI_04405 tRNA modification GTPase MnmE low > 75
Escherichia coli BL21 0.32 ECD_02292 putative DNA-binding protein 0.76 ECD_03590 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase low > 61
Escherichia coli ECOR27 0.32 NOLOHH_14040 ypdC Uncharacterized HTH-type transcriptional regulator YpdC 0.76 NOLOHH_07125 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 76
Escherichia coli ECOR38 0.32 HEPCGN_21565 ypdC Uncharacterized HTH-type transcriptional regulator YpdC 0.76 HEPCGN_13680 tRNA modification GTPase MnmE 0.41 24
Escherichia coli ECRC101 0.32 MCAODC_12885 ypdC Uncharacterized HTH-type transcriptional regulator YpdC 0.76 MCAODC_05495 tRNA modification GTPase MnmE — —
Escherichia coli ECRC99 0.32 KEDOAH_05865 ypdC Uncharacterized HTH-type transcriptional regulator YpdC 0.76 KEDOAH_13165 tRNA modification GTPase MnmE — —
Escherichia coli ECRC98 0.32 JDDGAC_26320 ypdC Uncharacterized HTH-type transcriptional regulator YpdC 0.76 JDDGAC_18605 tRNA modification GTPase MnmE — —
Escherichia coli ECRC102 0.32 NIAGMN_20130 ypdC Uncharacterized HTH-type transcriptional regulator YpdC 0.76 NIAGMN_12740 tRNA modification GTPase MnmE — —
Escherichia coli ECRC100 0.32 OKFHMN_22355 ypdC Uncharacterized HTH-type transcriptional regulator YpdC 0.76 OKFHMN_14985 tRNA modification GTPase MnmE — —
Escherichia fergusonii Becca 0.32 EFB2_01492 HTH-type transcriptional activator RhaR 0.76 EFB2_04925 tRNA modification GTPase MnmE 0.34 40
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF2340 Transcriptional regulator, AraC family 0.76 GFF1750 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 78
Klebsiella pneumoniae MKP103 0.27 KDGMDA_09345 AraC family transcriptional regulator 0.75 KDGMDA_08700 tRNA modification GTPase MnmE low > 95
Klebsiella michiganensis M5al 0.26 BWI76_RS10640 AraC family transcriptional regulator 0.77 BWI76_RS00050 tRNA modification GTPase — —

Not shown: 0 genomes with orthologs for CSW01_09150 only; 102 genomes with orthologs for CSW01_00015 only