| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli ECRC62 | 1.0 | BNILDI_10050 | idi | isopentenyl-diphosphate Delta-isomerase | 1.0 | BNILDI_17445 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | 0.68 | 3 |
| Escherichia coli ECRC98 | 0.98 | JDDGAC_23235 | idi | isopentenyl-diphosphate Delta-isomerase | 0.99 | JDDGAC_03810 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | low | > 86 |
| Escherichia coli ECRC101 | 0.98 | MCAODC_10115 | idi | isopentenyl-diphosphate Delta-isomerase | 0.99 | MCAODC_16620 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | low | > 87 |
| Escherichia coli ECOR27 | 0.98 | NOLOHH_11520 | idi | isopentenyl-diphosphate Delta-isomerase | 0.99 | NOLOHH_18960 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | low | > 75 |
| Escherichia coli ECRC100 | 0.98 | OKFHMN_19595 | idi | isopentenyl-diphosphate Delta-isomerase | 0.99 | OKFHMN_01320 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | low | > 80 |
| Escherichia coli BL21 | 0.98 | ECD_02721 | | isopentenyl diphosphate isomerase | 0.99 | ECD_01445 | | D,D-dipeptide ABC transporter periplasmic binding protein | low | > 61 |
| Escherichia coli ECRC99 | 0.98 | KEDOAH_08545 | idi | isopentenyl-diphosphate Delta-isomerase | 0.99 | KEDOAH_27125 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | — | — |
| Escherichia coli ECRC102 | 0.98 | NIAGMN_17360 | idi | isopentenyl-diphosphate Delta-isomerase | 0.99 | NIAGMN_25450 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.98 | OHPLBJKB_00826 | | Isopentenyl-diphosphate Delta-isomerase | 0.99 | OHPLBJKB_02230 | | putative D,D-dipeptide-binding periplasmic protein DdpA | low | > 73 |
| Escherichia coli BW25113 | 0.95 | b2889 | idi | isopentenyl-diphosphate delta-isomerase (NCBI) | 0.99 | b1487 | ddpA | D-ala-D-a la transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.93 | HEPCGN_18885 | idi | isopentenyl-diphosphate Delta-isomerase | 0.99 | HEPCGN_26475 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | low | > 87 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS23790 | | isopentenyl-diphosphate Delta-isomerase | 0.18 | BWI76_RS19180 | | diguanylate cyclase | — | — |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_2940 | | isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) | 0.84 | EX28DRAFT_1116 | | ABC-type dipeptide transport system, periplasmic component | low | > 76 |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_03748 | | Isopentenyl-diphosphate Delta-isomerase | 0.85 | MPMX20_02356 | | putative D,D-dipeptide-binding periplasmic protein DdpA | low | > 85 |
| Rahnella sp. WP5 | 0.52 | EX31_RS02215 | | isopentenyl-diphosphate Delta-isomerase | 0.74 | EX31_RS10240 | | ABC transporter substrate-binding protein | low | > 89 |
| Phaeobacter inhibens DSM 17395 | 0.25 | PGA1_c32010 | | isopentenyl-diphosphate delta-isomerase Idi | 0.16 | PGA1_c16270 | | putative periplasmic dipeptide transport protein | low | > 62 |
| Serratia liquefaciens MT49 | 0.24 | IAI46_11275 | | isopentenyl-diphosphate Delta-isomerase | 0.72 | IAI46_12025 | | ABC transporter substrate-binding protein | low | > 86 |
Not shown: 11 genomes with orthologs for BNILDI_10050 only; 17 genomes with orthologs for BNILDI_17445 only