Conservation of cofitness between SO3980 and SO2766 in Shewanella oneidensis MR-1
4 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
---|---|---|---|---|---|---|---|---|---|---|
Shewanella oneidensis MR-1 | 1.0 | SO3980 | cytochrome c552 nitrite reductase (NCBI ptt file) | 1.0 | SO2766 | conserved hypothetical protein (NCBI ptt file) | 0.36 | 9 | ||
Shewanella sp. ANA-3 | 0.89 | Shewana3 | nrfA | cytochrome c552 (RefSeq) | 0.94 | Shewana3 | peptidase M28 (RefSeq) | low | > 73 | |
Shewanella amazonensis SB2B | 0.83 | Sama | nrfA | cytochrome c552 (RefSeq) | 0.72 | Sama | hypothetical protein (RefSeq) | low | > 62 | |
Shewanella loihica PV-4 | 0.82 | Shew | nrfA | cytochrome c nitrite reductase (RefSeq) | 0.76 | Shew | peptidase M28 (RefSeq) | low | > 60 | |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.46 | Echvi | Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit | 0.13 | Echvi | Predicted aminopeptidases | low | > 79 |
Not shown: 19 genomes with orthologs for SO3980 only; 11 genomes with orthologs for SO2766 only