Conservation of cofitness between b3902 and b3669 in Escherichia coli BW25113

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3902 rhaD rhamnulose-1-phosphate aldolase (NCBI) 1.0 b3669 uhpA DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) 0.15 4
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04148 Rhamnulose-1-phosphate aldolase 1.00 OHPLBJKB_00031 Transcriptional regulatory protein UhpA low > 73
Escherichia fergusonii Becca 1.00 EFB2_04715 Rhamnulose-1-phosphate aldolase 1.00 EFB2_00029 Transcriptional regulatory protein UhpA low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS22480 rhamnulose-1-phosphate aldolase 1.00 ECOLIN_RS21160 transcriptional regulator UhpA low > 52
Escherichia coli ECRC62 0.99 BNILDI_05490 rhaD rhamnulose-1-phosphate aldolase 1.00 BNILDI_04190 uhpA_G97D DNA-binding response regulator UhpA — —
Escherichia coli ECOR27 0.99 NOLOHH_06035 rhaD rhamnulose-1-phosphate aldolase 1.00 NOLOHH_07335 uhpA_G97D DNA-binding response regulator UhpA low > 57
Escherichia coli ECRC101 0.98 OKFHMN_13910 rhaD rhamnulose-1-phosphate aldolase 1.00 OKFHMN_15180 uhpA_G97D DNA-binding response regulator UhpA — —
Escherichia coli ECOR38 0.98 HEPCGN_12545 rhaD rhamnulose-1-phosphate aldolase 1.00 HEPCGN_13905 uhpA_G97D DNA-binding response regulator UhpA low > 85
Escherichia coli ECRC99 0.98 KEDOAH_14245 rhaD rhamnulose-1-phosphate aldolase 1.00 KEDOAH_12965 uhpA_G97D DNA-binding response regulator UhpA — —
Escherichia coli ECRC98 0.98 JDDGAC_17535 rhaD rhamnulose-1-phosphate aldolase 1.00 JDDGAC_18805 uhpA_G97D DNA-binding response regulator UhpA — —
Escherichia coli ECRC102 0.98 NIAGMN_11665 rhaD rhamnulose-1-phosphate aldolase 1.00 NIAGMN_12940 uhpA_G97D DNA-binding response regulator UhpA — —
Escherichia coli ECRC101 0.98 MCAODC_04410 rhaD rhamnulose-1-phosphate aldolase 1.00 MCAODC_05690 uhpA_G97D DNA-binding response regulator UhpA — —
Escherichia coli BL21 0.98 ECD_03788 rhamnulose-1-phosphate aldolase 1.00 ECD_03553 response regulator in two-component regulatory system wtih UhpB low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF2263 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) 0.98 GFF304 Transcriptional regulatory protein UhpA low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_04565 Rhamnulose-1-phosphate aldolase 0.95 MPMX20_00033 Transcriptional regulatory protein UhpA low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS00670 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) (from data) 0.93 BWI76_RS27800 DNA-binding response regulator low > 92
Pectobacterium carotovorum WPP14 0.76 HER17_RS19260 rhamnulose-1-phosphate aldolase 0.44 HER17_RS14245 response regulator transcription factor low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS02310 rhamnulose-1-phosphate aldolase 0.93 DDA3937_RS02865 transcriptional regulator UhpA low > 74
Dickeya dianthicola 67-19 0.22 HGI48_RS01755 rhamnulose-1-phosphate aldolase 0.94 HGI48_RS02840 transcriptional regulator UhpA low > 71
Dickeya dianthicola ME23 0.22 DZA65_RS01830 rhamnulose-1-phosphate aldolase 0.94 DZA65_RS03015 transcriptional regulator UhpA low > 75
Bacteroides ovatus ATCC 8483 0.22 BACOVA_03604 putative rhamnulose-1-phosphate aldolase 0.17 BACOVA_01281 transcriptional regulator, LuxR family low > 94
Phocaeicola vulgatus CL09T03C04 0.19 HMPREF1058_RS08875 rhamnulose-1-phosphate aldolase 0.14 HMPREF1058_RS02885 response regulator transcription factor low > 67

Not shown: 7 genomes with orthologs for b3902 only; 13 genomes with orthologs for b3669 only