Conservation of cofitness between b3616 and b1123 in Escherichia coli BW25113

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3616 tdh L-threonine 3-dehydrogenase (NCBI) 1.0 b1123 potD spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) 0.35 14
Escherichia coli BL21 1.00 ECD_03474 L-threonine 3-dehydrogenase, NAD(P)-binding 1.00 ECD_01121 spermidine/putrescine ABC transporter periplasmic binding protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00083 L-threonine 3-dehydrogenase 1.00 OHPLBJKB_02545 Spermidine/putrescine-binding periplasmic protein low > 73
Escherichia coli ECOR27 1.00 NOLOHH_07595 tdh L-threonine 3-dehydrogenase 1.00 NOLOHH_20950 potD spermidine/putrescine ABC transporter substrate-binding protein PotD low > 75
Escherichia coli ECOR38 1.00 HEPCGN_14555 tdh L-threonine 3-dehydrogenase 1.00 HEPCGN_24060 potD spermidine/putrescine ABC transporter substrate-binding protein PotD low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20635 L-threonine 3-dehydrogenase 1.00 ECOLIN_RS06470 spermidine/putrescine ABC transporter substrate-binding protein PotD low > 55
Escherichia fergusonii Becca 1.00 EFB2_00194 L-threonine 3-dehydrogenase 1.00 EFB2_02852 Spermidine/putrescine-binding periplasmic protein low > 86
Escherichia coli ECRC62 0.99 BNILDI_03920 tdh L-threonine 3-dehydrogenase 1.00 BNILDI_19115 potD spermidine/putrescine ABC transporter substrate-binding protein PotD low > 75
Escherichia coli ECRC100 0.99 OKFHMN_15715 tdh L-threonine 3-dehydrogenase 0.99 OKFHMN_03435 potD spermidine/putrescine ABC transporter substrate-binding protein PotD low > 80
Escherichia coli ECRC101 0.99 MCAODC_06225 tdh L-threonine 3-dehydrogenase 0.99 MCAODC_22795 potD spermidine/putrescine ABC transporter substrate-binding protein PotD low > 87
Escherichia coli ECRC98 0.99 JDDGAC_19340 tdh L-threonine 3-dehydrogenase 0.99 JDDGAC_07095 potD spermidine/putrescine ABC transporter substrate-binding protein PotD low > 86
Escherichia coli ECRC102 0.99 NIAGMN_13475 tdh L-threonine 3-dehydrogenase 0.99 NIAGMN_24395 potD spermidine/putrescine ABC transporter substrate-binding protein PotD
Escherichia coli ECRC99 0.99 KEDOAH_12435 tdh L-threonine 3-dehydrogenase 0.99 KEDOAH_24320 potD spermidine/putrescine ABC transporter substrate-binding protein PotD
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF394 L-threonine 3-dehydrogenase (EC 1.1.1.103) 0.93 GFF3404 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) low > 78
Klebsiella michiganensis M5al 0.98 BWI76_RS27250 L-threonine 3-dehydrogenase 0.94 BWI76_RS11240 spermidine/putrescine ABC transporter substrate-binding protein PotD low > 92
Enterobacter asburiae PDN3 0.97 EX28DRAFT_3869 L-threonine 3-dehydrogenase (EC 1.1.1.103) 0.91 EX28DRAFT_1807 Spermidine/putrescine-binding periplasmic protein low > 76
Enterobacter sp. TBS_079 0.97 MPMX20_00116 L-threonine 3-dehydrogenase 0.91 MPMX20_01804 Spermidine/putrescine-binding periplasmic protein low > 85
Vibrio cholerae E7946 ATCC 55056 0.90 CSW01_18565 L-threonine 3-dehydrogenase 0.63 CSW01_07140 spermidine/putrescine ABC transporter substrate-binding protein low > 62
Pectobacterium carotovorum WPP14 0.89 HER17_RS20760 L-threonine 3-dehydrogenase 0.84 HER17_RS11675 spermidine/putrescine ABC transporter substrate-binding protein PotD low > 75

Not shown: 30 genomes with orthologs for b3616 only; 11 genomes with orthologs for b1123 only