Conservation of cofitness between PP_4741 and PP_1623 in Pseudomonas putida KT2440

11 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4741 Type I restriction enzyme EcoEI M protein 1.0 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.17 10
Escherichia coli ECOR38 0.68 HEPCGN_09455 hsdM Type I restriction enzyme EcoEI methylase subunit 0.63 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia coli ECRC100 0.67 OKFHMN_11415 hsdM Type I restriction enzyme EcoEI methylase subunit 0.63 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS low > 80
Escherichia coli ECRC98 0.67 JDDGAC_15010 hsdM Type I restriction enzyme EcoEI methylase subunit 0.63 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS low > 86
Escherichia coli ECRC101 0.67 MCAODC_01930 hsdM Type I restriction enzyme EcoEI methylase subunit 0.63 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia coli ECRC102 0.67 NIAGMN_09265 hsdM Type I restriction enzyme EcoEI methylase subunit 0.63 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS — —
Pseudomonas sp. RS175 0.18 PFR28_03897 Type I restriction enzyme EcoKI M protein 0.92 PFR28_00427 RNA polymerase sigma factor RpoS low > 88
Shewanella oneidensis MR-1 0.17 SO4265 hsdM-2 type I restriction-modification system, M subunit (NCBI ptt file) 0.62 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.17 Shewana3_2027 N-6 DNA methylase (RefSeq) 0.62 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_11435 SAM-dependent methyltransferase 0.92 AO353_16615 RNA polymerase sigma factor RpoS 0.26 46
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF1001 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) 0.63 GFF4788 RNA polymerase sigma factor RpoS low > 78
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_3109 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) 0.92 PfGW456L13_4674 RNA polymerase sigma factor RpoS low > 87

Not shown: 7 genomes with orthologs for PP_4741 only; 36 genomes with orthologs for PP_1623 only