Conservation of cofitness between JDDGAC_01855 and JDDGAC_17745 in Escherichia coli ECRC98
17 genomes with putative orthologs of both genes
| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli ECRC98 | 1.0 | JDDGAC_01855 | ldtE | L,D-transpeptidase LdtE | 1.0 | JDDGAC_17745 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.63 | 16 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_27280 | ldtE | L,D-transpeptidase LdtE | 1.00 | OKFHMN_14120 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 80 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_00830 | ldtE | L,D-transpeptidase LdtE | 1.00 | KEDOAH_14030 | hemN | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_00785 | ldtE | L,D-transpeptidase LdtE | 1.00 | NIAGMN_11875 | hemN | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_18130 | ldtE | L,D-transpeptidase LdtE | 1.00 | MCAODC_04620 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 87 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS09385 | | L,D-transpeptidase LdtE | 0.99 | ECOLIN_RS22285 | | oxygen-independent coproporphyrinogen III oxidase | low | > 55 |
| Escherichia fergusonii Becca | 1.00 | EFB2_02314 | | putative L,D-transpeptidase YnhG | 0.99 | EFB2_04750 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 86 |
| Escherichia coli ECRC62 | 0.99 | BNILDI_16590 | ldtE | L,D-transpeptidase LdtE | 1.00 | BNILDI_05280 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 75 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_17800 | ldtE | L,D-transpeptidase LdtE | 1.00 | NOLOHH_06250 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_02046 | | putative L,D-transpeptidase YnhG | 1.00 | OHPLBJKB_04186 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 73 |
| Escherichia coli BL21 | 0.99 | ECD_01647 | | murein L,D-transpeptidase | 1.00 | ECD_03752 | | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent | — | — |
| Escherichia coli BW25113 | 0.99 | b1678 | ynhG | hypothetical protein (NCBI) | 1.00 | b3867 | hemN | O2-independent coproporphyrinogen III oxidase (VIMSS) | low | > 76 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_05665 | ldtE | L,D-transpeptidase LdtE | 0.99 | HEPCGN_12755 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.86 | GFF3564 | | L,D-transpeptidase YnhG | 0.93 | GFF2219 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | low | > 78 |
| Klebsiella michiganensis M5al | 0.70 | BWI76_RS16970 | | murein L,D-transpeptidase | 0.90 | BWI76_RS00380 | | oxygen-independent coproporphyrinogen III oxidase | low | > 92 |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_1681 | | Uncharacterized protein conserved in bacteria | 0.93 | EX28DRAFT_4348 | | oxygen-independent coproporphyrinogen III oxidase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_01949 | | putative L,D-transpeptidase YnhG | 0.93 | MPMX20_04598 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 85 |
| Pseudomonas putida KT2440 | 0.29 | PP_2320 | | conserved exported protein of unknown function | 0.48 | PP_4264 | | oxygen-independent coproporphyrinogen III dehydrogenase | 0.29 | 60 |
Not shown: 0 genomes with orthologs for JDDGAC_01855 only; 70 genomes with orthologs for JDDGAC_17745 only