Conservation of cofitness between JDDGAC_01855 and JDDGAC_17350 in Escherichia coli ECRC98

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_01855 ldtE L,D-transpeptidase LdtE 1.0 JDDGAC_17350 cytR DNA-binding transcriptional regulator CytR 0.61 18
Escherichia coli ECRC99 1.00 KEDOAH_00830 ldtE L,D-transpeptidase LdtE 1.00 KEDOAH_14435 cytR DNA-binding transcriptional regulator CytR
Escherichia coli ECRC101 1.00 MCAODC_18130 ldtE L,D-transpeptidase LdtE 1.00 MCAODC_04225 cytR DNA-binding transcriptional regulator CytR low > 87
Escherichia coli ECRC102 1.00 NIAGMN_00785 ldtE L,D-transpeptidase LdtE 1.00 NIAGMN_11480 cytR DNA-binding transcriptional regulator CytR
Escherichia coli ECRC100 1.00 OKFHMN_27280 ldtE L,D-transpeptidase LdtE 1.00 OKFHMN_13725 cytR DNA-binding transcriptional regulator CytR low > 80
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09385 L,D-transpeptidase LdtE 1.00 ECOLIN_RS22650 DNA-binding transcriptional regulator CytR low > 55
Escherichia fergusonii Becca 1.00 EFB2_02314 putative L,D-transpeptidase YnhG 0.99 EFB2_04684 HTH-type transcriptional repressor CytR low > 86
Escherichia coli ECRC62 0.99 BNILDI_16590 ldtE L,D-transpeptidase LdtE 1.00 BNILDI_05660 cytR DNA-binding transcriptional regulator CytR low > 75
Escherichia coli ECOR27 0.99 NOLOHH_17800 ldtE L,D-transpeptidase LdtE 1.00 NOLOHH_05870 cytR DNA-binding transcriptional regulator CytR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02046 putative L,D-transpeptidase YnhG 1.00 OHPLBJKB_04117 HTH-type transcriptional repressor CytR low > 73
Escherichia coli BL21 0.99 ECD_01647 murein L,D-transpeptidase 1.00 ECD_03819 Anti-activator for CytR-CRP nucleoside utilization regulon
Escherichia coli BW25113 0.99 b1678 ynhG hypothetical protein (NCBI) 1.00 b3934 cytR DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_05665 ldtE L,D-transpeptidase LdtE 1.00 HEPCGN_12370 cytR DNA-binding transcriptional regulator CytR low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF3564 L,D-transpeptidase YnhG 0.89 GFF2316 Transcriptional (co)regulator CytR low > 78
Klebsiella michiganensis M5al 0.70 BWI76_RS16970 murein L,D-transpeptidase 0.86 BWI76_RS00765 DNA-binding transcriptional regulator CytR low > 92
Enterobacter asburiae PDN3 0.67 EX28DRAFT_1681 Uncharacterized protein conserved in bacteria 0.87 EX28DRAFT_4407 Transcriptional regulators low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_01949 putative L,D-transpeptidase YnhG 0.88 MPMX20_04535 HTH-type transcriptional repressor CytR low > 85

Not shown: 1 genomes with orthologs for JDDGAC_01855 only; 44 genomes with orthologs for JDDGAC_17350 only