Conservation of cofitness between JDDGAC_01855 and JDDGAC_10020 in Escherichia coli ECRC98

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_01855 ldtE L,D-transpeptidase LdtE 1.0 JDDGAC_10020 bioD dethiobiotin synthase 0.69 2
Escherichia coli ECRC102 1.00 NIAGMN_00785 ldtE L,D-transpeptidase LdtE 0.99 NIAGMN_04430 bioD dethiobiotin synthase
Escherichia coli ECRC99 1.00 KEDOAH_00830 ldtE L,D-transpeptidase LdtE 1.00 KEDOAH_21525 bioD dethiobiotin synthase
Escherichia coli ECRC100 1.00 OKFHMN_27280 ldtE L,D-transpeptidase LdtE 0.99 OKFHMN_06385 bioD dethiobiotin synthase low > 80
Escherichia coli ECRC101 1.00 MCAODC_18130 ldtE L,D-transpeptidase LdtE 1.00 MCAODC_25600 bioD dethiobiotin synthase low > 87
Escherichia fergusonii Becca 1.00 EFB2_02314 putative L,D-transpeptidase YnhG 0.96 EFB2_03327 ATP-dependent dethiobiotin synthetase BioD 1 low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09385 L,D-transpeptidase LdtE 0.96 ECOLIN_RS04145 dethiobiotin synthase
Escherichia coli ECRC62 0.99 BNILDI_16590 ldtE L,D-transpeptidase LdtE 0.97 BNILDI_21025 bioD dethiobiotin synthase low > 75
Escherichia coli ECOR27 0.99 NOLOHH_17800 ldtE L,D-transpeptidase LdtE 0.98 NOLOHH_22755 bioD dethiobiotin synthase low > 75
Escherichia coli BL21 0.99 ECD_01647 murein L,D-transpeptidase 0.98 ECD_00745 dethiobiotin synthetase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02046 putative L,D-transpeptidase YnhG 0.98 OHPLBJKB_02935 ATP-dependent dethiobiotin synthetase BioD 1 low > 73
Escherichia coli BW25113 0.99 b1678 ynhG hypothetical protein (NCBI) 0.98 b0778 bioD dethiobiotin synthetase (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_05665 ldtE L,D-transpeptidase LdtE 0.98 HEPCGN_01655 bioD dethiobiotin synthase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF3564 L,D-transpeptidase YnhG 0.77 GFF674 Dethiobiotin synthetase (EC 6.3.3.3) low > 78
Klebsiella michiganensis M5al 0.70 BWI76_RS16970 murein L,D-transpeptidase 0.75 BWI76_RS08775 dethiobiotin synthase low > 92
Enterobacter asburiae PDN3 0.67 EX28DRAFT_1681 Uncharacterized protein conserved in bacteria 0.79 EX28DRAFT_2213 dethiobiotin synthase low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_01949 putative L,D-transpeptidase YnhG 0.76 MPMX20_01406 ATP-dependent dethiobiotin synthetase BioD 1 low > 85
Pseudomonas putida KT2440 0.29 PP_2320 conserved exported protein of unknown function 0.43 PP_0366 dethiobiotin synthetase low > 96

Not shown: 0 genomes with orthologs for JDDGAC_01855 only; 58 genomes with orthologs for JDDGAC_10020 only