Conservation of cofitness between JDDGAC_01855 and JDDGAC_10020 in Escherichia coli ECRC98
17 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECRC98 | 1.0 | JDDGAC_01855 | ldtE | L,D-transpeptidase LdtE | 1.0 | JDDGAC_10020 | bioD | dethiobiotin synthase | 0.69 | 2 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_00785 | ldtE | L,D-transpeptidase LdtE | 0.99 | NIAGMN_04430 | bioD | dethiobiotin synthase | — | — |
Escherichia coli ECRC99 | 1.00 | KEDOAH_00830 | ldtE | L,D-transpeptidase LdtE | 1.00 | KEDOAH_21525 | bioD | dethiobiotin synthase | — | — |
Escherichia coli ECRC100 | 1.00 | OKFHMN_27280 | ldtE | L,D-transpeptidase LdtE | 0.99 | OKFHMN_06385 | bioD | dethiobiotin synthase | low | > 80 |
Escherichia coli ECRC101 | 1.00 | MCAODC_18130 | ldtE | L,D-transpeptidase LdtE | 1.00 | MCAODC_25600 | bioD | dethiobiotin synthase | low | > 87 |
Escherichia fergusonii Becca | 1.00 | EFB2_02314 | | putative L,D-transpeptidase YnhG | 0.96 | EFB2_03327 | | ATP-dependent dethiobiotin synthetase BioD 1 | low | > 86 |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS09385 | | L,D-transpeptidase LdtE | 0.96 | ECOLIN_RS04145 | | dethiobiotin synthase | — | — |
Escherichia coli ECRC62 | 0.99 | BNILDI_16590 | ldtE | L,D-transpeptidase LdtE | 0.97 | BNILDI_21025 | bioD | dethiobiotin synthase | low | > 75 |
Escherichia coli ECOR27 | 0.99 | NOLOHH_17800 | ldtE | L,D-transpeptidase LdtE | 0.98 | NOLOHH_22755 | bioD | dethiobiotin synthase | low | > 75 |
Escherichia coli BL21 | 0.99 | ECD_01647 | | murein L,D-transpeptidase | 0.98 | ECD_00745 | | dethiobiotin synthetase | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_02046 | | putative L,D-transpeptidase YnhG | 0.98 | OHPLBJKB_02935 | | ATP-dependent dethiobiotin synthetase BioD 1 | low | > 73 |
Escherichia coli BW25113 | 0.99 | b1678 | ynhG | hypothetical protein (NCBI) | 0.98 | b0778 | bioD | dethiobiotin synthetase (NCBI) | low | > 76 |
Escherichia coli ECOR38 | 0.99 | HEPCGN_05665 | ldtE | L,D-transpeptidase LdtE | 0.98 | HEPCGN_01655 | bioD | dethiobiotin synthase | low | > 87 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.86 | GFF3564 | | L,D-transpeptidase YnhG | 0.77 | GFF674 | | Dethiobiotin synthetase (EC 6.3.3.3) | low | > 78 |
Klebsiella michiganensis M5al | 0.70 | BWI76_RS16970 | | murein L,D-transpeptidase | 0.75 | BWI76_RS08775 | | dethiobiotin synthase | low | > 92 |
Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_1681 | | Uncharacterized protein conserved in bacteria | 0.79 | EX28DRAFT_2213 | | dethiobiotin synthase | low | > 76 |
Enterobacter sp. TBS_079 | 0.66 | MPMX20_01949 | | putative L,D-transpeptidase YnhG | 0.76 | MPMX20_01406 | | ATP-dependent dethiobiotin synthetase BioD 1 | low | > 85 |
Pseudomonas putida KT2440 | 0.29 | PP_2320 | | conserved exported protein of unknown function | 0.43 | PP_0366 | | dethiobiotin synthetase | low | > 96 |
Not shown: 0 genomes with orthologs for JDDGAC_01855 only; 58 genomes with orthologs for JDDGAC_10020 only