Conservation of cofitness between HER17_RS09575 and HER17_RS13855 in Pectobacterium carotovorum WPP14

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS09575 transcriptional regulator TyrR 1.0 HER17_RS13855 threonine/serine dehydratase 0.59 14
Serratia liquefaciens MT49 0.78 IAI46_13470 transcriptional regulator TyrR 0.29 IAI46_00035 threonine/serine dehydratase low > 86
Pantoea sp. MT58 0.71 IAI47_09440 transcriptional regulator TyrR 0.75 IAI47_21010 threonine/serine dehydratase low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_02454 Transcriptional regulatory protein TyrR 0.27 MPMX20_04021 L-threonine dehydratase catabolic TdcB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2679 Transcriptional repressor protein TyrR 0.25 GFF3210 Threonine dehydratase, catabolic (EC 4.3.1.19) low > 78
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0994 Transcriptional regulator of aromatic amino acids metabolism 0.26 EX28DRAFT_3178 Threonine dehydratase low > 76
Escherichia coli Nissle 1917 0.65 ECOLIN_RS07945 transcriptional regulator TyrR 0.26 ECOLIN_RS17940 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB — —
Escherichia fergusonii Becca 0.65 EFB2_02604 Transcriptional regulatory protein TyrR 0.26 EFB2_00697 L-threonine dehydratase catabolic TdcB low > 86
Escherichia coli ECRC99 0.65 KEDOAH_26470 tyrR transcriptional regulator TyrR 0.26 KEDOAH_09745 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB — —
Escherichia coli ECRC100 0.65 OKFHMN_02305 tyrR transcriptional regulator TyrR 0.26 OKFHMN_18400 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB low > 80
Escherichia coli ECRC98 0.65 JDDGAC_04850 tyrR transcriptional regulator TyrR 0.26 JDDGAC_22035 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB low > 86
Escherichia coli ECOR38 0.65 HEPCGN_25885 tyrR transcriptional regulator TyrR 0.26 HEPCGN_17235 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB low > 87
Escherichia coli ECRC101 0.65 MCAODC_15965 tyrR transcriptional regulator TyrR 0.26 MCAODC_08915 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB low > 87
Escherichia coli ECRC102 0.65 NIAGMN_26475 tyrR transcriptional regulator TyrR 0.25 NIAGMN_16165 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02359 Transcriptional regulatory protein TyrR 0.26 OHPLBJKB_00583 L-threonine dehydratase catabolic TdcB low > 73
Escherichia coli ECRC62 0.65 BNILDI_18150 tyrR transcriptional regulator TyrR 0.26 BNILDI_01345 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB low > 75
Escherichia coli BL21 0.65 ECD_01300 aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase 0.26 ECD_02984 L-threonine dehydratase, catabolic low > 61
Escherichia coli BW25113 0.65 b1323 tyrR DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) 0.26 b3117 tdcB threonine dehydratase (NCBI) low > 76
Escherichia coli ECOR27 0.65 NOLOHH_20000 tyrR transcriptional regulator TyrR 0.26 NOLOHH_10180 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB low > 75
Pseudomonas putida KT2440 0.39 PP_4489 sigma-54 dependent transcriptional regulator 0.29 PP_3191 putative threonine ammonia-lyase / dehydratase low > 96

Not shown: 28 genomes with orthologs for HER17_RS09575 only; 3 genomes with orthologs for HER17_RS13855 only