Conservation of cofitness between HER17_RS14040 and HER17_RS10930 in Pectobacterium carotovorum WPP14

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14040 putrescine aminotransferase 1.0 HER17_RS10930 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.66 12
Dickeya dadantii 3937 0.83 DDA3937_RS07565 putrescine aminotransferase 0.74 DDA3937_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS07420 putrescine aminotransferase 0.72 HGI48_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 71
Dickeya dianthicola ME23 0.82 DZA65_RS07930 putrescine aminotransferase 0.72 DZA65_RS10950 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 75
Enterobacter sp. TBS_079 0.73 MPMX20_03982 Putrescine aminotransferase 0.70 MPMX20_02512 Tryptophan biosynthesis protein TrpCF 0.15 85
Escherichia coli ECRC99 0.72 KEDOAH_09520 ygjG putrescine aminotransferase 0.69 KEDOAH_26085 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC98 0.72 JDDGAC_22260 ygjG putrescine aminotransferase 0.69 JDDGAC_05210 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 86
Escherichia coli ECRC102 0.72 NIAGMN_16390 ygjG putrescine aminotransferase 0.69 NIAGMN_26835 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC62 0.72 BNILDI_01100 ygjG putrescine aminotransferase 0.70 BNILDI_18470 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD low > 75
Escherichia coli ECOR27 0.72 NOLOHH_10415 ygjG putrescine aminotransferase 0.70 NOLOHH_20325 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD 0.60 57
Escherichia coli ECRC101 0.72 MCAODC_09140 ygjG putrescine aminotransferase 0.69 MCAODC_15600 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 87
Escherichia coli ECRC100 0.72 OKFHMN_18625 ygjG putrescine aminotransferase 0.69 OKFHMN_02665 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 80
Escherichia coli BW25113 0.72 b3073 ygjG putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent (RefSeq) 0.69 b1262 trpC N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) 0.43 19
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_00629 Putrescine aminotransferase 0.69 OHPLBJKB_02421 Tryptophan biosynthesis protein TrpCF low > 73
Escherichia coli BL21 0.72 ECD_02942 putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent 0.70 ECD_01236 indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase low > 61
Escherichia coli Nissle 1917 0.72 ECOLIN_RS17735 putrescine aminotransferase 0.70 ECOLIN_RS07605 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 55
Klebsiella michiganensis M5al 0.72 BWI76_RS24630 putrescine aminotransferase 0.71 BWI76_RS11850 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase low > 92
Escherichia coli ECOR38 0.72 HEPCGN_17475 ygjG putrescine aminotransferase 0.70 HEPCGN_25525 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 87
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3140 diamine aminotransferase apoenzyme (EC 2.6.1.29) 0.70 EX28DRAFT_0934 indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 76
Escherichia fergusonii Becca 0.71 EFB2_00738 Putrescine aminotransferase 0.70 EFB2_02664 Tryptophan biosynthesis protein TrpCF low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3184 Putrescine aminotransferase (EC 2.6.1.82) 0.69 GFF2724 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) low > 78

Not shown: 5 genomes with orthologs for HER17_RS14040 only; 11 genomes with orthologs for HER17_RS10930 only