Conservation of cofitness between HER17_RS20550 and HER17_RS03410 in Pectobacterium carotovorum WPP14

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20550 fatty acid oxidation complex subunit alpha FadB 1.0 HER17_RS03410 choline TMA-lyase-activating enzyme 0.63 8
Serratia liquefaciens MT49 0.78 IAI46_01130 fatty acid oxidation complex subunit alpha FadB 0.22 IAI46_13885 glycyl-radical enzyme activating protein low > 86
Escherichia coli ECOR27 0.75 NOLOHH_06375 fadB fatty acid oxidation complex subunit alpha FadB 0.28 NOLOHH_05760 pflC [formate-C-acetyltransferase]-activating enzyme low > 75
Escherichia coli BW25113 0.75 b3846 fadB fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase (NCBI) 0.28 b3952 pflC probable pyruvate formate lyase activating enzyme 2 (VIMSS) low > 76
Escherichia coli ECRC98 0.75 JDDGAC_17870 fadB fatty acid oxidation complex subunit alpha FadB 0.28 JDDGAC_17240 pflC [formate-C-acetyltransferase]-activating enzyme low > 86
Escherichia coli ECRC101 0.75 MCAODC_04750 fadB fatty acid oxidation complex subunit alpha FadB 0.28 MCAODC_04115 pflC [formate-C-acetyltransferase]-activating enzyme low > 87
Escherichia coli ECRC100 0.75 OKFHMN_14245 fadB fatty acid oxidation complex subunit alpha FadB 0.28 OKFHMN_13615 pflC [formate-C-acetyltransferase]-activating enzyme low > 80
Escherichia coli ECOR38 0.75 HEPCGN_12875 fadB fatty acid oxidation complex subunit alpha FadB 0.70 HEPCGN_14175 cutD choline TMA-lyase-activating enzyme 0.54 40
Escherichia coli ECRC99 0.75 KEDOAH_13905 fadB fatty acid oxidation complex subunit alpha FadB 0.28 KEDOAH_14545 pflC [formate-C-acetyltransferase]-activating enzyme — —
Escherichia coli ECRC102 0.75 NIAGMN_12000 fadB fatty acid oxidation complex subunit alpha FadB 0.28 NIAGMN_11365 pflC [formate-C-acetyltransferase]-activating enzyme — —
Enterobacter asburiae PDN3 0.74 EX28DRAFT_4510 fatty oxidation complex, alpha subunit FadB 0.26 EX28DRAFT_2140 glycyl-radical enzyme activating protein low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_04207 Fatty acid oxidation complex subunit alpha 0.28 OHPLBJKB_04098 Benzylsuccinate synthase activating enzyme low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF273 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 0.28 GFF2338 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) low > 78
Enterobacter sp. TBS_079 0.73 MPMX20_04436 Fatty acid oxidation complex subunit alpha 0.26 MPMX20_01464 Choline trimethylamine-lyase activating enzyme low > 85
Klebsiella michiganensis M5al 0.73 BWI76_RS01365 multifunctional fatty acid oxidation complex subunit alpha 0.70 BWI76_RS03570 choline TMA-lyase-activating enzyme low > 92
Escherichia coli ECRC62 0.73 BNILDI_05155 fadB fatty acid oxidation complex subunit alpha FadB 0.28 BNILDI_05765 pflC [formate-C-acetyltransferase]-activating enzyme low > 75
Escherichia coli BL21 0.73 ECD_03737 fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.28 ECD_03837 putative [formate-C-acetyltransferase 2]-activating enzyme; pyruvate formate-lyase 1-activating enzyme low > 61
Escherichia fergusonii Becca 0.73 EFB2_04771 Fatty acid oxidation complex subunit alpha 0.71 EFB2_04188 Choline trimethylamine-lyase activating enzyme low > 86
Rahnella sp. WP5 0.73 EX31_RS14565 fatty acid oxidation complex subunit alpha FadB 0.28 EX31_RS14680 [formate-C-acetyltransferase]-activating enzyme low > 89

Not shown: 35 genomes with orthologs for HER17_RS20550 only; 7 genomes with orthologs for HER17_RS03410 only