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  • Conservation of cofitness between GFF3325 and GFF776 in Sphingobium sp. HT1-2

    7 genomes with putative orthologs of both genes

    Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
    Sphingobium sp. HT1-2 1.0 GFF3325 YdcF-like protein 1.0 GFF776 RNA polymerase sigma-54 factor RpoN 0.81 17
    Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_2295 DUF218 domain 0.63 Ga0059261_2543 RNA polymerase, sigma 54 subunit, RpoN/SigL low > 68
    Azospirillum brasilense Sp245 0.32 AZOBR_RS19945 hypothetical protein 0.42 AZOBR_RS18870 RNA polymerase sigma54 factor low > 97
    Magnetospirillum magneticum AMB-1 0.31 AMB_RS22490 YdcF family protein 0.45 AMB_RS19925 RNA polymerase sigma-54 factor — —
    Azospirillum sp. SherDot2 0.30 MPMX19_05370 hypothetical protein 0.40 MPMX19_02668 RNA polymerase sigma-54 factor 2 low > 112
    Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS11435 YdcF family protein 0.40 A4249_RS16075 RNA polymerase factor sigma-54 low > 48
    Caulobacter crescentus NA1000 Δfur 0.28 CCNA_02301 YdcF-like family protein 0.42 CCNA_03713 RNA polymerase sigma-54 factor rpoN low > 67
    Caulobacter crescentus NA1000 0.28 CCNA_02301 YdcF-like family protein 0.42 CCNA_03713 RNA polymerase sigma-54 factor rpoN low > 66

    Not shown: 0 genomes with orthologs for GFF3325 only; 107 genomes with orthologs for GFF776 only