Conservation of cofitness between GFF5534 and GFF4670 in Variovorax sp. SCN45

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 1.0 GFF4670 Transcriptional regulator, AcrR family 0.55 5
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.14 PfGW456L13_3621 HTH-type transcriptional regulator BetI low > 87
Pseudomonas simiae WCS417 0.56 PS417_23245 queuine tRNA-ribosyltransferase 0.40 PS417_05900 TetR family transcriptional regulator — —
Escherichia coli ECRC101 0.54 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 0.20 MCAODC_17805 uidR DNA-binding transcriptional regulator UidR low > 87
Escherichia coli ECRC99 0.54 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 0.20 KEDOAH_00500 uidR DNA-binding transcriptional regulator UidR — —
Escherichia coli Nissle 1917 0.54 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 0.20 ECOLIN_RS09030 DNA-binding transcriptional regulator UidR — —
Escherichia coli ECRC98 0.54 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 0.20 JDDGAC_02195 uidR DNA-binding transcriptional regulator UidR low > 86
Escherichia coli ECRC62 0.54 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 0.20 BNILDI_16910 uidR DNA-binding transcriptional regulator UidR low > 75
Escherichia coli ECOR27 0.54 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 0.20 NOLOHH_18120 uidR DNA-binding transcriptional regulator UidR low > 75
Escherichia coli ECRC100 0.54 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.20 OKFHMN_27605 uidR DNA-binding transcriptional regulator UidR low > 80
Escherichia coli ECOR38 0.54 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 0.20 HEPCGN_05990 uidR DNA-binding transcriptional regulator UidR low > 87
Escherichia coli ECRC102 0.54 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 0.20 NIAGMN_00470 uidR DNA-binding transcriptional regulator UidR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 0.20 OHPLBJKB_02108 hypothetical protein low > 73
Escherichia coli BL21 0.54 ECD_00354 tRNA-guanine transglycosylase 0.20 ECD_01587 transcriptional repressor — —
Escherichia coli BW25113 0.54 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 0.20 b1618 uidR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia fergusonii Becca 0.54 EFB2_03651 Queuine tRNA-ribosyltransferase 0.20 EFB2_02374 hypothetical protein low > 86
Phaeobacter inhibens DSM 17395 0.45 PGA1_c20570 queuine tRNA-ribosyltransferase Tgt 0.18 PGA1_262p01280 transcriptional regulator, TetR family low > 62
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_01659 queuine tRNA-ribosyltransferase 0.20 CCNA_00852 TetR family transcriptional regulator low > 67
Caulobacter crescentus NA1000 0.41 CCNA_01659 queuine tRNA-ribosyltransferase 0.20 CCNA_00852 TetR family transcriptional regulator 0.43 50

Not shown: 81 genomes with orthologs for GFF5534 only; 1 genomes with orthologs for GFF4670 only