Conservation of cofitness between ECD_00540 and ECD_04065 in Escherichia coli BL21

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00540 DUF419 family protein 1.0 ECD_04065 L-ribulose 5-phosphate 4-epimerase low > 61
Escherichia coli ECRC101 1.00 MCAODC_26880 ybdF MmcQ/YjbR family DNA-binding protein 0.99 MCAODC_02640 ulaF L-ribulose-5-phosphate 4-epimerase UlaF low > 87
Escherichia coli ECRC99 1.00 KEDOAH_20305 ybdF MmcQ/YjbR family DNA-binding protein 0.99 KEDOAH_16030 ulaF L-ribulose-5-phosphate 4-epimerase UlaF — —
Escherichia coli ECRC100 1.00 OKFHMN_07665 ybdF MmcQ/YjbR family DNA-binding protein 0.99 OKFHMN_12125 ulaF L-ribulose-5-phosphate 4-epimerase UlaF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03130 hypothetical protein 0.99 OHPLBJKB_03844 L-ribulose-5-phosphate 4-epimerase UlaF low > 73
Escherichia coli ECRC102 1.00 NIAGMN_05720 ybdF MmcQ/YjbR family DNA-binding protein 0.99 NIAGMN_09975 ulaF L-ribulose-5-phosphate 4-epimerase UlaF — —
Escherichia coli ECOR27 1.00 NOLOHH_24045 ybdF MmcQ/YjbR family DNA-binding protein 0.99 NOLOHH_04385 ulaF L-ribulose-5-phosphate 4-epimerase UlaF low > 75
Escherichia coli BW25113 1.00 b0579 ybdF hypothetical protein (NCBI) 0.99 b4198 ulaF L-ribulose 5-phosphate 4-epimerase (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_11310 ybdF MmcQ/YjbR family DNA-binding protein 0.99 JDDGAC_15765 ulaF L-ribulose-5-phosphate 4-epimerase UlaF low > 86
Escherichia coli ECRC62 1.00 BNILDI_22055 ybdF MmcQ/YjbR family DNA-binding protein 0.99 BNILDI_07100 ulaF L-ribulose-5-phosphate 4-epimerase UlaF low > 75
Escherichia coli ECOR38 1.00 HEPCGN_00625 ybdF MmcQ/YjbR family DNA-binding protein 0.99 HEPCGN_10355 ulaF L-ribulose-5-phosphate 4-epimerase UlaF low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03165 MmcQ/YjbR family DNA-binding protein 0.99 ECOLIN_RS24360 L-ribulose-5-phosphate 4-epimerase UlaF — —
Escherichia fergusonii Becca 0.99 EFB2_03515 hypothetical protein 0.98 EFB2_04337 L-ribulose-5-phosphate 4-epimerase UlaF low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF4483 FIG074102: hypothetical protein 0.89 GFF852 L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) (L-ascorbate utilization protein F) low > 78
Klebsiella michiganensis M5al 0.73 BWI76_RS07460 hypothetical protein 0.89 BWI76_RS02645 L-ribulose-5-phosphate 4-epimerase low > 92
Enterobacter sp. TBS_079 0.70 MPMX20_01134 hypothetical protein 0.86 MPMX20_00475 L-ribulose-5-phosphate 4-epimerase UlaF low > 85
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_2122 Uncharacterized protein conserved in bacteria 0.50 Echvi_0503 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) (from data) low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS16310 MmcQ/YjbR family DNA-binding protein 0.49 ABZR88_RS14510 L-ribulose-5-phosphate 4-epimerase low > 71

Not shown: 3 genomes with orthologs for ECD_00540 only; 11 genomes with orthologs for ECD_04065 only