Conservation of cofitness between ECD_02979 and ECD_01827 in Escherichia coli BL21
17 genomes with putative orthologs of both genes
| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_02979 | | L-serine dehydratase 3, anaerobic | 1.0 | ECD_01827 | | murein DD-endopeptidase, space-maker hydrolase, septation protein | low | > 61 |
| Escherichia coli BW25113 | 1.00 | b4471 | tdcG | L-serine dehydratase 3 (NCBI) | 1.00 | b1856 | yebA | orf, hypothetical protein (VIMSS) | low | > 76 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_17260 | tdcG | L-serine ammonia-lyase | 1.00 | HEPCGN_04715 | mepM | murein DD-endopeptidase MepM | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00588 | | L-serine dehydratase TdcG | 1.00 | OHPLBJKB_01872 | | Murein DD-endopeptidase MepM | low | > 73 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_01320 | tdcG | L-serine ammonia-lyase | 1.00 | BNILDI_15540 | mepM | murein DD-endopeptidase MepM | low | > 75 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_10205 | tdcG | L-serine ammonia-lyase | 1.00 | NOLOHH_16750 | mepM | murein DD-endopeptidase MepM | low | > 75 |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_09720 | tdcG | L-serine ammonia-lyase | 1.00 | KEDOAH_01795 | mepM | murein DD-endopeptidase MepM | — | — |
| Escherichia fergusonii Becca | 0.99 | EFB2_00702 | | L-serine dehydratase TdcG | 1.00 | EFB2_02086 | | Murein DD-endopeptidase MepM | low | > 86 |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_22060 | tdcG | L-serine ammonia-lyase | 1.00 | JDDGAC_00885 | mepM | murein DD-endopeptidase MepM | low | > 86 |
| Escherichia coli ECRC101 | 0.99 | MCAODC_08940 | tdcG | L-serine ammonia-lyase | 1.00 | MCAODC_19095 | mepM | murein DD-endopeptidase MepM | low | > 87 |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_16190 | tdcG | L-serine ammonia-lyase | 1.00 | NIAGMN_01750 | mepM | murein DD-endopeptidase MepM | — | — |
| Escherichia coli ECRC100 | 0.99 | OKFHMN_18425 | tdcG | L-serine ammonia-lyase | 1.00 | OKFHMN_26310 | mepM | murein DD-endopeptidase MepM | low | > 80 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS17915 | | L-serine ammonia-lyase | 1.00 | ECOLIN_RS10340 | | murein DD-endopeptidase MepM | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.87 | GFF3206 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.93 | GFF1635 | | Cell wall endopeptidase, family M23/M37 | low | > 78 |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_03505 | | serine dehydratase | 0.22 | AO353_07140 | | peptidase M23 | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.51 | Psest_0784 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | 0.22 | Psest_3636 | | Membrane proteins related to metalloendopeptidases | — | — |
| Pseudomonas putida KT2440 | 0.50 | PP_0987 | | L-serine dehydratase | 0.23 | PP_0435 | | Peptidase, M23/M37 family | low | > 96 |
| Variovorax sp. SCN45 | 0.46 | GFF3439 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.14 | GFF2065 | | Peptidase, M23/M37 family | low | > 127 |
Not shown: 17 genomes with orthologs for ECD_02979 only; 28 genomes with orthologs for ECD_01827 only