Conservation of cofitness between ECD_02276 and ECD_01556 in Escherichia coli BL21

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02276 D-serine dehydratase 1.0 ECD_01556 putative selenate reductase, periplasmic 0.69 27
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01355 D-serine dehydratase 0.99 OHPLBJKB_02139 Putative dimethyl sulfoxide reductase chain YnfE low > 73
Escherichia coli ECRC62 1.00 BNILDI_12985 dsdA D-serine ammonia-lyase 0.99 BNILDI_17070 ynfE Putative dimethyl sulfoxide reductase chain YnfE low > 75
Escherichia coli ECOR27 1.00 NOLOHH_14130 dsdA D-serine ammonia-lyase 0.99 NOLOHH_18280 ynfE Putative dimethyl sulfoxide reductase chain YnfE low > 75
Escherichia coli BW25113 1.00 b2366 dsdA D-serine dehydratase (NCBI) 0.99 b1587 ynfE oxidoreductase subunit (NCBI) low > 76
Escherichia coli ECRC102 0.99 NIAGMN_20225 dsdA D-serine ammonia-lyase 0.99 NIAGMN_00300 ynfE Putative dimethyl sulfoxide reductase chain YnfE — —
Escherichia coli ECRC100 0.99 OKFHMN_22450 dsdA D-serine ammonia-lyase 0.99 OKFHMN_27775 ynfE Putative dimethyl sulfoxide reductase chain YnfE low > 80
Escherichia coli ECRC99 0.99 KEDOAH_05775 dsdA D-serine ammonia-lyase 0.99 KEDOAH_00330 ynfE Putative dimethyl sulfoxide reductase chain YnfE — —
Escherichia coli ECRC98 0.99 JDDGAC_26410 dsdA D-serine ammonia-lyase 0.99 JDDGAC_02365 ynfE Putative dimethyl sulfoxide reductase chain YnfE low > 86
Escherichia coli ECRC101 0.99 MCAODC_12980 dsdA D-serine ammonia-lyase 0.99 MCAODC_17635 ynfE Putative dimethyl sulfoxide reductase chain YnfE 0.43 86
Escherichia fergusonii Becca 0.99 EFB2_04196 D-serine dehydratase 0.99 EFB2_02405 Putative dimethyl sulfoxide reductase chain YnfE low > 86
Escherichia coli ECOR38 0.99 HEPCGN_21655 dsdA D-serine ammonia-lyase 0.98 HEPCGN_06155 ynfE Putative dimethyl sulfoxide reductase chain YnfE low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS13620 D-serine ammonia-lyase 0.99 ECOLIN_RS08870 selenate/tellurate reductase subunit YnfE — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF293 D-serine dehydratase (EC 4.3.1.18) 0.87 GFF2483 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) low > 78
Klebsiella michiganensis M5al 0.87 BWI76_RS27860 D-serine dehydratase 0.88 BWI76_RS15925 dimethyl sulfoxide reductase subunit A low > 92
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3966 D-serine ammonia-lyase (EC 4.3.1.18) 0.88 EX28DRAFT_1463 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_00023 D-serine dehydratase 0.86 MPMX20_02084 Putative dimethyl sulfoxide reductase chain YnfE low > 85
Serratia liquefaciens MT49 0.69 IAI46_12905 D-serine ammonia-lyase 0.84 IAI46_08580 dimethyl sulfoxide reductase subunit A low > 86

Not shown: 11 genomes with orthologs for ECD_02276 only; 6 genomes with orthologs for ECD_01556 only