Pairwise Alignments

Query, 317 a.a., NADH-quinone oxidoreductase subunit H from Rhodanobacter denitrificans FW104-10B01

Subject, 307 a.a., formate hydrogenlyase subunit HycD from Escherichia coli Nissle 1917

 Score =  142 bits (358), Expect = 1e-38
 Identities = 101/294 (34%), Positives = 145/294 (49%), Gaps = 7/294 (2%)

Query: 18  ALAPLLAGWVAQCRAWLQNRSAPPLLLPYRTLRKLFRKDAALATQASPLFRAAPYAVFGA 77
           A+APLL+G     RA L NR  P +L  YR + KL  + +     +  +FR  PY + G 
Sbjct: 15  AVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGV 74

Query: 78  MATAAAIIPSVTTDLPLARVADAIALVGLFATARVFIALAAMDIGTVFGSMGARREMMIG 137
           M T A  +P VT   PL ++ D I L+ LFA AR F A++ +D G+ F ++GA RE M+G
Sbjct: 75  MLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLG 134

Query: 138 FLAEPALLMVLFNAFLMFGSTALPTIVKGTLDADGLTLHPSLAFAGVAFVMVLLAENARI 197
            L EP LL+ L+ A  + GST +  I   T+    L+    L  A  A       E  ++
Sbjct: 135 VLVEPMLLLGLWVAAQVAGSTNISNIT-DTVYHWPLSQSIPLVLALCACAFATFIEMGKL 193

Query: 198 PIDNPGTHLEVTMIHESMVLEYSARHLALIEWASWLKLFNYACIGFTLFVPWG-IAPHTA 256
           P D      E   + E  + EYS     +++W   LK      +   +F+PWG +   T 
Sbjct: 194 PFDLAEAEQE---LQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTV 250

Query: 257 GPMGLLLAIVWLLAKLAVAGAVLAVIETVSAKLRIFRAPEFLSMAFLLAVLGLL 310
           G  GLLLA+V  + KL V   V+A+ E   A+LR+   P      F  A L  +
Sbjct: 251 G--GLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFV 302