Pairwise Alignments

Query, 464 a.a., flagellar filament capping protein FliD from Rhodanobacter denitrificans FW104-10B01

Subject, 575 a.a., flagellar hook-associated protein 2, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 95.1 bits (235), Expect = 5e-24
 Identities = 97/412 (23%), Positives = 165/412 (40%), Gaps = 63/412 (15%)

Query: 12  SGLLTSMGVGSGLDVASLVSQLVAAKKAPQQNQITSQANAANTQLSALGQVSAALSALQS 71
           SG +   G+G G+D A ++  L   ++ P  N++T        +  A G +   L+  ++
Sbjct: 6   SGSINFTGLGGGVDFAQVIDGLKKIEQVPM-NRLTLWKADWQRRKDAFGDLRTELATFKN 64

Query: 72  AMAPLTDGSAFTARTVGSSDTTVLGASATGTPVNGSYNIVVTQLAS-ALKASSGAFASST 130
            +  +     F  +T  SS+  V  A+ +   + G+Y I V +LAS  +   +  FA  T
Sbjct: 65  VVDGMDTLEEFLVKTASSSNAAVASATTSSAALEGTYRIEVNKLASNGIWTFNDTFADKT 124

Query: 131 TAVGTGTLTIAVGSQSMSLTLDSTNNSLAA--------IRDAINGSSSNPGVSATIVTGT 182
             V T T       QS   T   T  ++          +++ IN    NPGV A+ V   
Sbjct: 125 QQVNTSTT-----DQSFVYTYKGTTRTMTVPPGTTLDGLKNIINNDPQNPGVRASFVQNG 179

Query: 183 DGAHLVLSGTRTGAANGFSVSSSGGDGGLAALKYDPAATTGNGLSVVTAAADAKYSIDGL 242
           +     + G   G+    ++ +S     L     DP             A DA++ ++G 
Sbjct: 180 NAWTFQMHGMDLGSEASLTIDASTNLSKLPG--NDPTKWQ------TQQATDAEFRVNGW 231

Query: 243 AAS----SAGNTVSSAIDGLTLNLVKAGSSTLSVSSDSSKATGALTNLVNTYNSFVGIYQ 298
            A+    S  NTVS+ I+GL ++L   G++ L+V++D  K    +T  V+  N+      
Sbjct: 232 PATGWLKSTSNTVSNVIEGLNISLKDVGTTQLTVATDIEKIKEKITAFVDGMNAVRSKIT 291

Query: 299 NLTRYDATSGTAGA--------------LLGDATLNGINNTLSSIVGGTANG-------- 336
             T+ D+   T  A              L G+  +  I++ L + +   + G        
Sbjct: 292 EQTKVDSNKATISADKSASLFQAQKGSILTGNYGVQLISSRLKTAIADKSTGFEYQYKDG 351

Query: 337 --------ASLSSIGISLQVD------GTLKLDSGKLATALGDGGKQVGALF 374
                   +SL+ IGI    +      G L +D  KL  AL +    V  LF
Sbjct: 352 NINRGDIYSSLAQIGILTNAEEGNPNYGLLTIDQEKLDAALKNNPTAVAELF 403