Pairwise Alignments

Query, 342 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 331 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  143 bits (360), Expect = 7e-39
 Identities = 90/301 (29%), Positives = 161/301 (53%), Gaps = 7/301 (2%)

Query: 38  IQVNGIKVVSILLIIWGHLSVDNFLTPANL-NAIMYSVSAIGIAAVGMAFITLSGNLFML 96
           +Q  G   + ++L+       D+FLT  NL N +    S  GI AVGM F+ L+  +  L
Sbjct: 23  VQRFGTLAIFLVLVAVATWWSDSFLTRGNLLNVLRQVASTAGIMAVGMLFVILTRGID-L 81

Query: 97  SMAATAALSTIV---FASTLHFGLPVALLSVSVLGIAIGSIQGVVVGTARVNPIIATIAV 153
           S+ +  AL +++   F + L +G    +  V + G A G + G  +   R+   + ++A+
Sbjct: 82  SVGSVMALGSVLTGYFCAMLGYGTGATIFLVLLCGAACGLVTGGFIAYLRLPSFVMSLAM 141

Query: 154 ASIVMGVGSYVSGGMTV-VGKGDASWLGIGK-FASLVPNQLVIFLAFSLAANYWVERTRF 211
            ++  G+   +S G  + +    A++   G  F   +P  +++  A  +A    +  TRF
Sbjct: 142 MAVARGLSLIISEGRPIPLSDAGAAFSSFGSGFVLGIPQPVILMFAIYIAGGVVLNFTRF 201

Query: 212 GRELRLIGLNPVTAAYSGIRVPRTLVIAFVIAGFSAALAGGLFASQAGQGNLKLAAGLDF 271
           GR +  IG N      SGI VPR +V  +VI+G  A LAG + AS+ G G+ ++  G + 
Sbjct: 202 GRVITAIGSNEEAVRLSGIAVPRYIVAVYVISGLLAGLAGIIAASRTGVGSAQVGIGAEL 261

Query: 272 DAIAAVLVAGISIRGGQGKIIDAVYGAIFLALIGNLLLVHGLSFEIQLMVKGAVVVLAVI 331
           + IAAV++ G S+ GG+G +I+ + GA+ + +I N++ + G+    Q +  GA++V+A++
Sbjct: 262 NVIAAVVIGGASLMGGKGGVINTLLGALVMGIITNIMNLAGVPGYHQQVYMGAIIVVAML 321

Query: 332 L 332
           L
Sbjct: 322 L 322