Pairwise Alignments

Query, 342 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  128 bits (321), Expect = 2e-34
 Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 12/302 (3%)

Query: 49  LLIIWGHLSVDNFLTPANLNAIMYSVSAIGIAAVGMAFITLSGNLFML--SMAATAALST 106
           LL+I G +   NF++  NL  +    + I I AVG  F+  +G+L +   SM A  A   
Sbjct: 33  LLLIVGAMVNPNFISLNNLANVATRSAFIAIIAVGATFVISAGDLDLSVGSMVAFVASLM 92

Query: 107 IVFASTLHFGLPVALLSVSVL-----GIAIGSIQGVVVGTARVNPIIATIAVASIVMGVG 161
           I+F ++     P  +L+ +VL     G   G   G++    R+ P IAT+    I  G+ 
Sbjct: 93  ILFMNSGVIADPALMLTAAVLFAVVAGSVCGLANGLITTVGRIEPFIATLGTMGIYRGLT 152

Query: 162 SYVS-GGMTVVGKGDASWL-GIGKFASLV--PNQLVIFLAFSLAANYWVERTRFGRELRL 217
           +++S GG   + + +   L     F S++  P  + I LA +  A + + RTR+GR +  
Sbjct: 153 TWLSQGGAITLREPELQELYRPAYFGSILGMPVPIAIILAVTAVAAFILYRTRYGRHVVA 212

Query: 218 IGLNPVTAAYSGIRVPRTLVIAFVIAGFSAALAGGLFASQAGQGNLKLAAGLDFDAIAAV 277
           +G N   A YSGI V R   IAFVI G   A+A  L+  + G  +       +  AI AV
Sbjct: 213 VGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGILWELQAITAV 272

Query: 278 LVAGISIRGGQGKIIDAVYGAIFLALIGNLLLVHGLSFEIQL-MVKGAVVVLAVILAALI 336
           +V G +++GG G++   + GA  L L+GN++L+     E  +  ++GA++++A+++   +
Sbjct: 273 VVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAMQGAIIIIAMLVQRSL 332

Query: 337 AR 338
            R
Sbjct: 333 VR 334