Pairwise Alignments

Query, 378 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

Subject, 402 a.a., multidrug effflux MFS transporter from Pseudomonas fluorescens SBW25-INTG

 Score =  181 bits (460), Expect = 2e-50
 Identities = 115/371 (30%), Positives = 196/371 (52%), Gaps = 5/371 (1%)

Query: 3   LPAIADISHALGVSLAFASQTLSVFIFGFVLGPLLFGPLSDRIGRRPILLAGLVVFTIAG 62
           LPA+  +  +L  S A    +L+VF     +  L +GP+SD  GR+P + AGLV+F +A 
Sbjct: 27  LPALPTLGASLQASPALVQMSLTVFFVIIGVCQLFYGPISDVFGRKPPIYAGLVIFAVAS 86

Query: 63  IACTFAQDINLLLSARFLQGCAAGAAATLPIAIVRDQFEGVQARKLQSHLALVNNLAPLI 122
           + C  A  I  L++ R LQ   A A   +P AIVRD + G +A KL + L LV +++P++
Sbjct: 87  VGCALAPTIESLIAFRALQAFGACAGMVIPRAIVRDLYTGHEAAKLMALLMLVMSVSPIL 146

Query: 123 APLLGSAILVVGNWRWIYAALAVCGVILWLRAQTSFDET--ATRKSSNAAASLLTSYLSV 180
           APL GS ++ + +WR ++A LAV  V   +       ET  A R+      +  +SY ++
Sbjct: 147 APLAGSLVIALWSWREVFAVLAVVAVACLVMTIVQLPETHPAERRLGKTLGNAFSSYGAL 206

Query: 181 LKSRRFLVSTLIMAFNFAGMFAYIAASPLVFMNNLGMTSAGFAVLFALTAMGTIAGSWVN 240
           L+   F+  +++  F  A  F +I ++P V++ + G+T   F++ FAL A    A S + 
Sbjct: 207 LRDPVFIGLSVVCGFGLATFFVFIGSAPFVYIEHYGLTPTQFSLGFALNAASFFAMSQLT 266

Query: 241 GRLIHAGFAEHRVLGGALLASLLISLGLVVESQLAIYPIYILTALVVMSNLCTGIVMPNA 300
            RL  A F    ++ G+++A   + + ++  + L +  + ++  ++ +     G+++P A
Sbjct: 267 ARL-SARFGLAPLIRGSVVAVAAV-MAVLATTTLWVDSLALMMTMLFIGFGFLGLLLPAA 324

Query: 301 THSALEDLSITAGAGAALLRATQMLGGACASLLAGAFYDGQTSHAMAGVMLACAVLGALT 360
              +LED    AG+ +ALL A QM+  A +  L G F D   +  + G+ L C +   LT
Sbjct: 325 GVLSLEDHGAVAGSASALLGAIQMITAAVSMTLVGVFADHTPAPMLIGIAL-CGIAAMLT 383

Query: 361 FLIGHRSVKPH 371
            L   R +  H
Sbjct: 384 TLWTLRRLPAH 394