Pairwise Alignments

Query, 243 a.a., DNA-binding response regulator from Pseudomonas fluorescens FW300-N2E2

Subject, 241 a.a., osmolarity response regulator (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (398), Expect = 1e-43
 Identities = 85/238 (35%), Positives = 140/238 (58%), Gaps = 10/238 (4%)

Query: 1   VLIVDDSRKIRDPLATFLRRHTFEVRTAADAAGMWQLLKQHSFEVIILDVSLPDGDGFEL 60
           +L+VDD  ++R  L  +L    ++VR+AA+A  M +LL++ +F +++LD+ LP  DG  +
Sbjct: 8   ILVVDDDMRLRALLERYLMEQGYQVRSAANAEQMDRLLERENFHLLVLDLMLPGEDGLSI 67

Query: 61  CSRLYRRSDT-PVILLTARDTCADRVRGLDLGADDYVTKPFEPRELVARINSVLRRRRPT 119
           C RL +  +T P+++LTA+    DR+ GL+LGADDY+ KPF PREL+ARI +V+RR+ P 
Sbjct: 68  CRRLRQNGNTIPIVMLTAKGDEVDRIIGLELGADDYLPKPFNPRELLARIKAVMRRQAPE 127

Query: 120 GTKQAISASDPVAVKMSPCYLFADWRYDARHATLARDQEPPILLSTVESKLLQVFLNHPN 179
                    + +         F ++  +     +   +E  I L++ E  +L+V ++HP 
Sbjct: 128 VPGAPTQQEEEIT--------FGEFTLNLATREMYHGEE-AISLTSGEFAVLKVLVSHPR 178

Query: 180 TLLPRERLIDLTTATDRDVTDRAIDRQVSRLRRKLAHKPGEPELLRTIWGGGYLLASD 237
             L R++L++L    D    +R+ID QVSRLRR +      P  ++T+WG GY+   D
Sbjct: 179 EPLSRDKLMNLARGRDYSALERSIDVQVSRLRRLIEKDAANPRYIQTVWGLGYVFVPD 236