Pairwise Alignments

Query, 426 a.a., PhaK-like protein from Pseudomonas fluorescens FW300-N2E2

Subject, 416 a.a., outer membrane porin OprD family from Pseudomonas aeruginosa PA14

 Score =  407 bits (1046), Expect = e-118
 Identities = 203/419 (48%), Positives = 281/419 (67%), Gaps = 5/419 (1%)

Query: 8   RSVPAHPSLISLTLALCAGSSAVVQADQNSGFVDGAKATLNLRNAYINRNFTNPNVAQGK 67
           RS P      SL   L AG  ++  A+   GF++ A  +L LRN Y NR+F  P  AQ K
Sbjct: 3   RSAPNLLKSASLAPVLLAGLPSLAGAE---GFIEDASVSLGLRNLYFNRDFRQPGAAQSK 59

Query: 68  AEEWTQNFILDAKSGFTQGVVGFGVDVLGTYSLKLDGGRGTAGTQLLPVHDDGRPADDFG 127
            EEW Q F+L AKSG+TQG +G GV+++G   LKLD     AG+ LLP H DGR ADD+ 
Sbjct: 60  QEEWAQGFLLQAKSGYTQGTLGLGVELIGQLGLKLDSSPDRAGSGLLPRHADGRAADDYA 119

Query: 128 RLGVALKAKVSKTELKVGEWMPVLPILRSDDGRSLPQTFRGGQVTSTEINGLSLYGGQFR 187
           RLGVA K K+S TELK+GE +P LPIL  +DGR LPQTF+GG +TS EI GL+L+GGQ R
Sbjct: 120 RLGVAPKLKLSNTELKLGELLPELPILLRNDGRLLPQTFQGGMLTSREIAGLTLHGGQMR 179

Query: 188 ANSPRNDASMEDMSMNGRGAFTSDRFNFGGGEYAFNEKRTQVGVWYAELSDIYQQQYFNL 247
           + S RN +  +D+S++GRG   SDRF++ G EY FN +R+QVG+W A L DIY+Q Y++L
Sbjct: 180 SLSQRNSSDHQDLSVDGRGGVFSDRFDYLGAEYRFNAERSQVGLWQARLQDIYRQDYYSL 239

Query: 248 THSQPIGDWTLGANLGYFIGKEDGSALAGDLDNKTAFAMLSAKYGGNTFYVGLQKVGGDD 307
           +H Q  G W LGA++G F  +++G+A  GDL+N+      SA  G ++   G Q++ GDD
Sbjct: 240 SHKQSFGGWRLGASVGLFDTRDEGAAKLGDLENRALTGFFSATRGRHSLGAGYQRMYGDD 299

Query: 308 AWMRVNGTSGGTLANDSYNSSYDNAKEKSWQLRHDFNFAAVGVPGLTLMNRYISGDNVHT 367
             + + GTS   L ND    ++ +A E+SWQLR+D++F A+G+PGLT M RY SG +  T
Sbjct: 300 GMLYIAGTS-TPLVNDIQVRNFTSAGERSWQLRYDYDFVALGIPGLTAMARYASGAHART 358

Query: 368 ATVDDGKEWGRETELAYTVQSGALKNLNVKWRNASIRRDFSTNEFDENRIFINYPISLL 426
             +DDG+ W R+ ++AY +QSG LKNL ++WRNA +R + +  + DENR+ ++Y + LL
Sbjct: 359 KAMDDGRAWERDVDVAYVIQSGPLKNLGLRWRNAMLRSNHAA-DVDENRLILSYSLPLL 416