Pairwise Alignments

Query, 1026 a.a., Cation efflux system protein from Pseudomonas fluorescens FW300-N2E2

Subject, 1029 a.a., efflux RND transporter permease subunit from Rahnella sp. WP5

 Score = 1751 bits (4534), Expect = 0.0
 Identities = 872/1012 (86%), Positives = 962/1012 (95%)

Query: 3    FNLSALAVRERAITVFLIFLIAVAGTLAFFKLGRAEDPPFTVKQLTVITAWPGATAREMQ 62
            FNLSALAVRER+IT+FLI LI VAG L+FF+LGRAEDPPFTVKQ+T+I+AWPGATA+EMQ
Sbjct: 6    FNLSALAVRERSITLFLIILITVAGILSFFELGRAEDPPFTVKQMTIISAWPGATAQEMQ 65

Query: 63   DQVAEPLEKRLQELKWYDRSETYTRPGLAFTMVSLLDRTPPSQVQEEFYQARKKLDDEAT 122
            DQVAEPLEKR+QELKWYDRSETYTRPGLAFTM+SL D TPPSQVQEEFYQARKKL DE  
Sbjct: 66   DQVAEPLEKRMQELKWYDRSETYTRPGLAFTMLSLKDSTPPSQVQEEFYQARKKLGDETK 125

Query: 123  KLPAGVIGPLVNDEYSDVTFALFALKAKGEPQRLLVRDAEVLRQRLLHVAGVKKVNIIGE 182
             LPAGVIGP+VNDE+SDVTFALFALKAKGEPQRLLVRDAE LRQ++LHV GVKKVNIIGE
Sbjct: 126  NLPAGVIGPMVNDEFSDVTFALFALKAKGEPQRLLVRDAESLRQQILHVPGVKKVNIIGE 185

Query: 183  QAERIFISFSHDRLATLGVSPQDIFAALNSQNVLTPAGSIETKGPQVFLRVEGAFDTLEK 242
            QAERIF+SFSHDRLATLG+SPQDIF+ALNSQNVLTPAGSI+TKGPQVF+R++GAFD LEK
Sbjct: 186  QAERIFVSFSHDRLATLGISPQDIFSALNSQNVLTPAGSIDTKGPQVFIRLDGAFDKLEK 245

Query: 243  IRDTPLTIQGRTLKLSDVATVERGYEDPATFLVRNNGEEALLLGVIMREGWNGLDLGKAL 302
            IR+TP+ +QGRTL+LSDVATVERGYEDPATFL+RN GE ALLLG++MR+GWNGLDLGKAL
Sbjct: 246  IRETPIVVQGRTLQLSDVATVERGYEDPATFLIRNQGEPALLLGIVMRDGWNGLDLGKAL 305

Query: 303  DAETSKINEDMPLGMTLTKVTDQAVNIDSAVGEFMVKFFVALLVVMLVCFLSMGWRVGVV 362
            DAET+KINE MPLGMTLTKVTDQ+VNI SAV EFM+KFFVALLVVM+VCF+SMGWRVGVV
Sbjct: 306  DAETAKINEGMPLGMTLTKVTDQSVNISSAVDEFMIKFFVALLVVMVVCFVSMGWRVGVV 365

Query: 363  VAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDRI 422
            VAAAVPLTLAIVFVVM A+GKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDRI
Sbjct: 366  VAAAVPLTLAIVFVVMEASGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDRI 425

Query: 423  KASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAVAF 482
            KASAYAWSHTAAPML+GTLVTA+GFMPNGFAQSTAGEYTSNMFWIVGIALIASW+VAV F
Sbjct: 426  KASAYAWSHTAAPMLAGTLVTAVGFMPNGFAQSTAGEYTSNMFWIVGIALIASWIVAVVF 485

Query: 483  TPYLGMKMLPDIKPVEGGHAAIYNTRHYNRFRQVLARVISHKWLVAGTVITLFVVAVLGM 542
            TPYLG+KMLP IK VEGGHAAIY+TRHYNRFR+VL RVI+ KW+VAGTVI +F VA+LGM
Sbjct: 486  TPYLGVKMLPKIKTVEGGHAAIYDTRHYNRFRRVLTRVIARKWIVAGTVIAVFTVAILGM 545

Query: 543  GLVKKQFFPTSDRPEVMVEVQMPYGTSIEQTSAATAKVEAWLQKQAEAKIVTAYIGQGAP 602
            GLVKKQFFPTSDRPEV+VEVQMPYGTSIEQTSAATAK+EAWL+KQ EAKIVT+YIGQG+P
Sbjct: 546  GLVKKQFFPTSDRPEVLVEVQMPYGTSIEQTSAATAKIEAWLRKQKEAKIVTSYIGQGSP 605

Query: 603  RFFLAMAPELPDPSFAKIVVLTDSQEARETLKFRLREAVAAGLAPEARVRATQIVFGPYS 662
            RF+LAMAPELPDPSFAKIVVLTDSQEARE LKFRLREA A+GLAPEARVR TQ+VFGPYS
Sbjct: 606  RFYLAMAPELPDPSFAKIVVLTDSQEAREALKFRLREAAASGLAPEARVRVTQLVFGPYS 665

Query: 663  PFPVAYRVMGPDPTKLREIAARVQDVMQASPMMRTVNTDWGPLVPTLHFNLDQDRLQAVG 722
            P+PVAYRVMGPDP KLREIA +V+ VMQASPMMRTVNTDWGP VP LHF L+QDRLQAVG
Sbjct: 666  PYPVAYRVMGPDPDKLREIADKVEKVMQASPMMRTVNTDWGPRVPALHFTLNQDRLQAVG 725

Query: 723  LTSSAVAEQLQFLLAGVPITAVREDIRSVQVVGRAAGDIRLDPARIEGFTLVGAAGQRIP 782
            LTS+AVA+QLQFLL+GVPIT+VREDIRSVQV+GRAAGDIRLDP +I GFTLVG++GQRIP
Sbjct: 726  LTSNAVAQQLQFLLSGVPITSVREDIRSVQVMGRAAGDIRLDPEKIAGFTLVGSSGQRIP 785

Query: 783  LSQVGEVDVRMEDPILRRRDRTPTITVRGDIAEGLQPPDVSSAMLVLLQPILDTLPDGYR 842
            LSQ+GEV+V+MEDP+LRRRDRTPTITVRGDIAE LQPPDVS+AM+  LQP++DTLP GYR
Sbjct: 786  LSQIGEVEVQMEDPVLRRRDRTPTITVRGDIAENLQPPDVSTAMIKALQPVIDTLPAGYR 845

Query: 843  IQQAGAIEESGKANQAILPLLPIMVALTLLIIIVQVRSISAMLMVFLTAPLGLIGVVPML 902
            I+QAG+IEESGKA +A+ PL PIM+A+TLLIII+QVRS+SAM+MVFLTAPLGLIGVVP L
Sbjct: 846  IEQAGSIEESGKATEAMAPLFPIMIAMTLLIIILQVRSMSAMVMVFLTAPLGLIGVVPTL 905

Query: 903  LIFQQPFGINALVGLIALSGILMRNTLILIGQIHHNAQEGLDPFNAVIEATVQRARPVLL 962
            L+F QPFGINALVGLIALSGILMRNTLILIGQIHHN QEGL PF+AV+EATVQRARPVLL
Sbjct: 906  LLFNQPFGINALVGLIALSGILMRNTLILIGQIHHNEQEGLPPFHAVVEATVQRARPVLL 965

Query: 963  TALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTLMTLVFLPAMYSIWFKIRP 1014
            TA+AAILAFIPLTHSVFWGTLAYTLIGGTF GT++TLVFLPAMY+IWF+IRP
Sbjct: 966  TAMAAILAFIPLTHSVFWGTLAYTLIGGTFGGTIITLVFLPAMYAIWFRIRP 1017