Pairwise Alignments

Query, 487 a.a., Outer membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

Subject, 487 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

 Score =  213 bits (542), Expect = 1e-59
 Identities = 152/474 (32%), Positives = 222/474 (46%), Gaps = 9/474 (1%)

Query: 4   LRPLAFLVSASLMTGCAVGPDYQRPNAVLSDRFLGQPSVEQRSGTTQASLTTWWEGFGDP 63
           +RP A  +   L++ CAVGPDYQ+P+     +F         + +       WWE + DP
Sbjct: 15  IRPFALGLCVVLLSACAVGPDYQKPSMAAPAQFKAAQGWRTATPSDGMGKGAWWEVYKDP 74

Query: 64  VLSDFIAKALEQNLDLAQASARVAQARAGLGAANAALLPSGNISGQAARAYQSVETPQGQ 123
            L+  + +    N  +AQ  A+  QA+  + ++ AA LP+ +++    R+ Q   T    
Sbjct: 75  QLNALVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQGTGTS--- 131

Query: 124 LLNSNPGFDRYGNSYELDLGASWELDVFGGLRRGREAALAEYQASEAGAAATRLAVAAQT 183
             NS        NSY   LG SWE DV+G LRRG EA  A  QAS A  AA RL++ ++ 
Sbjct: 132 --NSGTSASGIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSEL 189

Query: 184 ADIYITLRGLQARLDIANHQVKTQQDLLEKVQLLYSKGLAASYQVRQTEGALAQVQATVP 243
              Y+ LR +  +  +    V   Q  L   Q  Y  G++ S  V Q +  L   QA + 
Sbjct: 190 VQNYLQLRVIDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLI 249

Query: 244 VLQTGLDAAMNALDVMLGTPPGTHRPQLTETGSIPLPPQISEMGTPADLLRRRPDLIVAE 303
            L        NA+ V++G  P      L  + SIP  PQI   G P+ LL RRPD+  AE
Sbjct: 250 DLAWQRAQFENAIAVLMGMAPADF--NLPASTSIPQLPQIPP-GLPSQLLERRPDIAAAE 306

Query: 304 RRLAASNARIGEAVAEYYPKFSLSALLGSATAVSAGHLFSGGASQASGALGLRWRLFDFG 363
           R +  +NA IG A A YYP F+LS   G +++  A  +       + G   L   LFD G
Sbjct: 307 RSVMGANANIGVARAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGP-QLALTLFDGG 365

Query: 364 RINAQIDQAKGQEAEALAAYRQSALRATEDVENAFSALVNREAQATTLTVGEASLSEARR 423
           R +A++D+ +    + +A YRQ+ L   ++VEN    L   E +A        S  ++ R
Sbjct: 366 RRSAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLR 425

Query: 424 SSFIAYQKGTASLIDVLNADQTLLQASDARAQARTESARAAVAAFRALGGGWQA 477
            +   Y+ G    +DV+N   T L    +          A+V    ALGGGW A
Sbjct: 426 LTNNQYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIASVQLIAALGGGWDA 479